Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-180 |
| Cow position: | chr9:31297662-31297836 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 7 |
| Conread position: | 1-285 |
| Cow position: | chr9:6134142-6133864 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 12 |
| Conread position: | 3-292 |
| Cow position: | chr9:6590002-6590299 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 7-277 |
| Cow position: | chr9:63662352-63662091 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 8-145 |
| Cow position: | chr9:5147570-5147430 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-220 |
| Cow position: | chr9:46990427-46990225 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 8-272 |
| Cow position: | chr9:56294055-56294308 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 8-285 |
| Cow position: | chr9:10290414-10290140 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 8-286 |
| Cow position: | chr9:21499787-21499518 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 8-290 |
| Cow position: | chr9:23518924-23518644 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 8-293 |
| Cow position: | chr9:49458264-49458523 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 8-304 |
| Cow position: | chr9:36426033-36426328 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 9-263 |
| Cow position: | chr9:7798511-7798764 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 9-277 |
| Cow position: | chr9:51279798-51280067 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 9-289 |
| Cow position: | chr9:46090689-46090425 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 10-266 |
| Cow position: | chr9:25574506-25574750 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 10-277 |
| Cow position: | chr9:36396717-36396982 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 10-287 |
| Cow position: | chr9:25794340-25794613 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 127 |
| Conread position: | 13-287 |
| Cow position: | chr9:44609750-44610016 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 243, 16 |
| Conread position: | 14-285 |
| Cow position: | chr9:6126998-6126738 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 15-285 |
| Cow position: | chr9:9733470-9733201 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 20-283 |
| Cow position: | chr9:50822628-50822372 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 235, 25 |
| Conread position: | 41-285 |
| Cow position: | chr9:45406718-45406955 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 212, 49 |
| Conread position: | 46-287 |
| Cow position: | chr9:41954037-41954270 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 125 |
| Conread position: | 51-285 |
| Cow position: | chr9:15223891-15223658 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 50 |
| Conread position: | 53-255 |
| Cow position: | chr9:61851724-61851515 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 77-285 |
| Cow position: | chr9:10160359-10160157 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 83, 105 |
| Conread position: | 86-285 |
| Cow position: | chr9:5478699-5478887 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 164, 9 |
| Conread position: | 88-224 |
| Cow position: | chr9:23520653-23520523 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 108-294 |
| Cow position: | chr9:26528561-26528743 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 147, 7 |
| Conread position: | 121-311 |
| Cow position: | chr9:51276173-51275980 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.