Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-285 |
| Cow position: | chrX:27529651-27529372 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 7 |
| Conread position: | 3-301 |
| Cow position: | chrX:16893644-16893349 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 3-303 |
| Cow position: | chrX:35981738-35981446 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 5 |
| Conread position: | 8-245 |
| Cow position: | chrX:40315901-40315663 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 8-255 |
| Cow position: | chrX:19046027-19046258 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 8-255 |
| Cow position: | chrX:25180470-25180226 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 8-283 |
| Cow position: | chrX:832342-832075 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 8-285 |
| Cow position: | chrX:1742893-1743173 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 137 |
| Conread position: | 8-285 |
| Cow position: | chrX:38129197-38129477 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 8-286 |
| Cow position: | chrX:34767751-34768049 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-143 |
| Cow position: | chrX:29372452-29372319 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 9-285 |
| Cow position: | chrX:29815857-29815582 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 10-285 |
| Cow position: | chrX:3513237-3513506 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 11-286 |
| Cow position: | chrX:38741172-38740901 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 163 |
| Conread position: | 12-276 |
| Cow position: | chrX:12835015-12834760 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 14-294 |
| Cow position: | chrX:3450764-3451046 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 168 |
| Conread position: | 15-198 |
| Cow position: | chrX:34635492-34635675 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 167 |
| Conread position: | 15-199 |
| Cow position: | chrX:6999633-6999449 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 28-285 |
| Cow position: | chrX:34704432-34704680 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 233, 59 |
| Conread position: | 32-285 |
| Cow position: | chrX:38674919-38674665 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 34-221 |
| Cow position: | chrX:31910699-31910891 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 43-287 |
| Cow position: | chrX:33159071-33158826 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 48-285 |
| Cow position: | chrX:37251485-37251257 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 49-200 |
| Cow position: | chrX:10062244-10062094 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 51-161 |
| Cow position: | chrX:23320512-23320402 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-285 |
| Cow position: | chrX:29145481-29145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 95-230 |
| Cow position: | chrX:29539082-29538948 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 101-287 |
| Cow position: | chrX:36874172-36873989 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 136, 80 |
| Conread position: | 134-286 |
| Cow position: | chrX:33008530-33008382 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 47 |
Show alignments to all cow chromosomes.