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Cow genome map

           
Conread name:
           
Lng1-LNG010103A02
        

               
Conread position:
               
235-754
               

               
Cow position:
               
chr1:1461897-1461394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 23
               

               
Conread position:
               
236-749
               

               
Cow position:
               
chr1:88130188-88130686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 29
               

               
Conread position:
               
239-749
               

               
Cow position:
               
chr1:3386576-3386079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 29
               

               
Conread position:
               
242-753
               

               
Cow position:
               
chr1:18880986-18880460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 441
               

               
Conread position:
               
242-753
               

               
Cow position:
               
chr1:62925032-62925546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
244-753
               

               
Cow position:
               
chr1:69288112-69287632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
244-754
               

               
Cow position:
               
chr1:25887695-25887224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
245-658
               

               
Cow position:
               
chr1:37420540-37420140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
246-749
               

               
Cow position:
               
chr1:76546105-76545615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
246-749
               

               
Cow position:
               
chr1:76623511-76623020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
246-749
               

               
Cow position:
               
chr1:102435594-102435099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
246-755
               

               
Cow position:
               
chr1:18244951-18244446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
247-749
               

               
Cow position:
               
chr1:42735895-42736385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
247-759
               

               
Cow position:
               
chr1:55775596-55776091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 18
               

               
Conread position:
               
248-393
               

               
Cow position:
               
chr1:53364135-53364278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
248-703
               

               
Cow position:
               
chr1:72119596-72120034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
251-597
               

               
Cow position:
               
chr1:94659319-94659650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
251-611
               

               
Cow position:
               
chr1:72079924-72080265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
251-641
               

               
Cow position:
               
chr1:3934702-3934348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
251-739
               

               
Cow position:
               
chr1:33550364-33550840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
251-747
               

               
Cow position:
               
chr1:56194489-56194006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:5501420-5501903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:22000510-22000028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:57367690-57367205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:62245208-62244720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:62806361-62805878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:63606341-63605854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:69402435-69402920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:69923022-69922535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 20
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:72187430-72186945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 18
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:72980724-72981195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:79457525-79457040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:85881193-85881670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:86699778-86699290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 14
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr1:93853963-93854448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 14
               

               
Conread position:
               
251-756
               

               
Cow position:
               
chr1:8824509-8824994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
251-759
               

               
Cow position:
               
chr1:13253989-13253500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
251-759
               

               
Cow position:
               
chr1:25180589-25180093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 14
               

               
Conread position:
               
251-759
               

               
Cow position:
               
chr1:25549506-25550001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-759
               

               
Cow position:
               
chr1:79336352-79335867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 14
               

               
Conread position:
               
251-759
               

               
Cow position:
               
chr1:100597939-100597444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 14
               

               
Conread position:
               
251-760
               

               
Cow position:
               
chr1:58335278-58335775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 17
               

               
Conread position:
               
254-703
               

               
Cow position:
               
chr1:52173061-52172589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 229
               

               
Conread position:
               
255-765
               

               
Cow position:
               
chr1:55324079-55323575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 14
               

               
Conread position:
               
260-753
               

               
Cow position:
               
chr1:17013311-17012803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
261-393
               

               
Cow position:
               
chr1:45097055-45097187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-438
               

               
Cow position:
               
chr1:62854360-62854183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-448
               

               
Cow position:
               
chr1:101149303-101149489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
261-581
               

               
Cow position:
               
chr1:37455165-37455470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
261-633
               

               
Cow position:
               
chr1:30284175-30283794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 153
               

               
Conread position:
               
261-727
               

               
Cow position:
               
chr1:30023773-30023285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
261-753
               

               
Cow position:
               
chr1:43019546-43020056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 221
               

               
Conread position:
               
261-754
               

               
Cow position:
               
chr1:82919190-82918729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 78
               

               
Conread position:
               
261-754
               

               
Cow position:
               
chr1:87244260-87244726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
261-760
               

               
Cow position:
               
chr1:89740788-89740306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
261-766
               

               
Cow position:
               
chr1:67285956-67286434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 164
               

               
Conread position:
               
266-748
               

               
Cow position:
               
chr1:40514038-40513572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 73
               

               
Conread position:
               
268-749
               

               
Cow position:
               
chr1:49974730-49974263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 72
               

               
Conread position:
               
268-749
               

               
Cow position:
               
chr1:57567406-57567878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 97
               

               
Conread position:
               
268-749
               

               
Cow position:
               
chr1:76753192-76752725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
268-756
               

               
Cow position:
               
chr1:17942368-17941876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
271-624
               

               
Cow position:
               
chr1:11863818-11863462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
92, 155
               

               
Conread position:
               
281-605
               

               
Cow position:
               
chr1:61732524-61732834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 105
               

               
Conread position:
               
289-754
               

               
Cow position:
               
chr1:34688831-34689270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 104
               

               
Conread position:
               
290-739
               

               
Cow position:
               
chr1:97227229-97226784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
290-749
               

               
Cow position:
               
chr1:67835678-67835211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
290-753
               

               
Cow position:
               
chr1:61308457-61308935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
290-753
               

               
Cow position:
               
chr1:91898455-91898931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
290-755
               

               
Cow position:
               
chr1:79637463-79636994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 28
               

               
Conread position:
               
291-753
               

               
Cow position:
               
chr1:20828358-20828822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
291-753
               

               
Cow position:
               
chr1:31395878-31396346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 192
               

               
Conread position:
               
291-753
               

               
Cow position:
               
chr1:89425038-89425519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 199
               

               
Conread position:
               
297-754
               

               
Cow position:
               
chr1:98661803-98661363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
300-662
               

               
Cow position:
               
chr1:73071528-73071180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
300-753
               

               
Cow position:
               
chr1:82563971-82564435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
302-753
               

               
Cow position:
               
chr1:21086867-21087346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 188
               

               
Conread position:
               
303-749
               

               
Cow position:
               
chr1:28872569-28873005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 67
               

               
Conread position:
               
310-749
               

               
Cow position:
               
chr1:31366595-31366149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
312-735
               

               
Cow position:
               
chr1:67902936-67902508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
326-754
               

               
Cow position:
               
chr1:28801933-28801491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
326-755
               

               
Cow position:
               
chr1:102555605-102556019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
356-635
               

               
Cow position:
               
chr1:97560252-97560528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
356-657
               

               
Cow position:
               
chr1:13449724-13450024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 114
               

               
Conread position:
               
356-659
               

               
Cow position:
               
chr1:8027609-8027306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 114
               

               
Conread position:
               
356-673
               

               
Cow position:
               
chr1:99995560-99995245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
356-676
               

               
Cow position:
               
chr1:58223834-58224147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
356-732
               

               
Cow position:
               
chr1:53198325-53198704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 114
               

               
Conread position:
               
356-732
               

               
Cow position:
               
chr1:86548589-86548223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
356-747
               

               
Cow position:
               
chr1:80359632-80359243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 114
               

               
Conread position:
               
356-748
               

               
Cow position:
               
chr1:82652177-82652563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 114
               

               
Conread position:
               
356-749
               

               
Cow position:
               
chr1:56722665-56723082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 114
               

               
Conread position:
               
356-749
               

               
Cow position:
               
chr1:87449486-87449881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:6708557-6708161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:8553861-8554261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:11292571-11292171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:33850793-33851212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:39543304-39543704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:40052892-40053288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:40685152-40684757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:55276946-55276553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:56162864-56163259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 116
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:56489380-56489772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:59210601-59210204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:71563034-71562645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:79921194-79920795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 114
               

               
Conread position:
               
356-753
               

               
Cow position:
               
chr1:91719105-91718701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 115
               

               
Conread position:
               
356-770
               

               
Cow position:
               
chr1:17037018-17036606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
357-749
               

               
Cow position:
               
chr1:85781246-85780850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 113
               

               
Conread position:
               
358-753
               

               
Cow position:
               
chr1:85791233-85791622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 67
               

               
Conread position:
               
358-754
               

               
Cow position:
               
chr1:57656094-57656483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 212
               

               
Conread position:
               
358-759
               

               
Cow position:
               
chr1:88759101-88759506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
365-756
               

               
Cow position:
               
chr1:77163324-77163714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
183, 10
               

               
Conread position:
               
381-711
               

               
Cow position:
               
chr1:8330457-8330133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
391-753
               

               
Cow position:
               
chr1:33711630-33711995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
391-754
               

               
Cow position:
               
chr1:42289976-42290328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
391-754
               

               
Cow position:
               
chr1:52233529-52233179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
391-754
               

               
Cow position:
               
chr1:88634946-88635304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
391-754
               

               
Cow position:
               
chr1:101149413-101149767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
394-732
               

               
Cow position:
               
chr1:19993104-19992767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
395-735
               

               
Cow position:
               
chr1:68219276-68218929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
399-754
               

               
Cow position:
               
chr1:62854253-62853909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
400-754
               

               
Cow position:
               
chr1:76703789-76703444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
400-770
               

               
Cow position:
               
chr1:59933123-59933502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
401-712
               

               
Cow position:
               
chr1:84148993-84149303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
402-732
               

               
Cow position:
               
chr1:20988348-20988671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
228, 66
               

               
Conread position:
               
402-754
               

               
Cow position:
               
chr1:86608783-86609129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
402-767
               

               
Cow position:
               
chr1:99021373-99021008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
261, 66
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr1:18014603-18014279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
408-736
               

               
Cow position:
               
chr1:63501047-63501373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
167, 15
               

               
Conread position:
               
410-593
               

               
Cow position:
               
chr1:102548792-102548973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
410-744
               

               
Cow position:
               
chr1:68607961-68607625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 58
               

               
Conread position:
               
426-755
               

               
Cow position:
               
chr1:5318371-5318694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
234, 44
               

               
Conread position:
               
431-735
               

               
Cow position:
               
chr1:13645330-13645645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
433-713
               

               
Cow position:
               
chr1:33134048-33133771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
434-754
               

               
Cow position:
               
chr1:72656594-72656914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 34
               

               
Conread position:
               
436-770
               

               
Cow position:
               
chr1:69766085-69766414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 34
               

               
Conread position:
               
440-732
               

               
Cow position:
               
chr1:45097342-45097617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
219, 7
               

               
Conread position:
               
443-754
               

               
Cow position:
               
chr1:30027910-30027610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
214, 25
               

               
Conread position:
               
443-754
               

               
Cow position:
               
chr1:57661159-57661473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
449-754
               

               
Cow position:
               
chr1:89771050-89770750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
450-733
               

               
Cow position:
               
chr1:46835010-46835286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
458-754
               

               
Cow position:
               
chr1:52918973-52918687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
236, 95
               

               
Conread position:
               
463-711
               

               
Cow position:
               
chr1:28722431-28722682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
463-732
               

               
Cow position:
               
chr1:40953350-40953621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 160
               

               
Conread position:
               
463-753
               

               
Cow position:
               
chr1:89809987-89809689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 228
               

               
Conread position:
               
463-754
               

               
Cow position:
               
chr1:69536542-69536837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 206
               

               
Conread position:
               
463-754
               

               
Cow position:
               
chr1:89900062-89899769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 156
               

               
Conread position:
               
463-754
               

               
Cow position:
               
chr1:97123472-97123765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 156
               

               
Conread position:
               
463-756
               

               
Cow position:
               
chr1:38414451-38414737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
463-758
               

               
Cow position:
               
chr1:18406559-18406253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
466-754
               

               
Cow position:
               
chr1:101858338-101858051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 166
               

               
Conread position:
               
471-747
               

               
Cow position:
               
chr1:78359845-78360112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
472-753
               

               
Cow position:
               
chr1:87207775-87207485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
475-750
               

               
Cow position:
               
chr1:54366161-54365892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
475-754
               

               
Cow position:
               
chr1:40307726-40307997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
477-754
               

               
Cow position:
               
chr1:38387970-38387714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
482-753
               

               
Cow position:
               
chr1:33895336-33895612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
484-732
               

               
Cow position:
               
chr1:80556390-80556144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
484-754
               

               
Cow position:
               
chr1:87969010-87969280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
497-758
               

               
Cow position:
               
chr1:13879810-13880072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
162, 66
               

               
Conread position:
               
502-735
               

               
Cow position:
               
chr1:56144652-56144416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
153, 189
               

               
Conread position:
               
512-754
               

               
Cow position:
               
chr1:102548924-102549163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
531-741
               

               
Cow position:
               
chr1:29361715-29361928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
554-749
               

               
Cow position:
               
chr1:52359548-52359348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
556-754
               

               
Cow position:
               
chr1:99349286-99349085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
576-753
               

               
Cow position:
               
chr1:98783806-98783986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
580-753
               

               
Cow position:
               
chr1:22864162-22863986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
595-759
               

               
Cow position:
               
chr1:82407569-82407407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
610-755
               

               
Cow position:
               
chr1:72080558-72080706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
621-759
               

               
Cow position:
               
chr1:78289678-78289819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.