Cow genome map
Conread name: | Lng1-LNG010103A02 |
Conread position: | 239-753 |
Cow position: | chr10:21741308-21740795 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 57 |
Conread position: | 239-759 |
Cow position: | chr10:57990508-57990002 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 424, 26 |
Conread position: | 243-739 |
Cow position: | chr10:14859444-14859919 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 36 |
Conread position: | 246-749 |
Cow position: | chr10:32650202-32650684 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 417, 19 |
Conread position: | 246-753 |
Cow position: | chr10:39179221-39179740 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 12 |
Conread position: | 247-724 |
Cow position: | chr10:49310009-49310463 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 325 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 107, 11 |
Conread position: | 247-749 |
Cow position: | chr10:8289431-8289934 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 18 |
Conread position: | 248-616 |
Cow position: | chr10:54126922-54127275 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 126 |
Conread position: | 248-755 |
Cow position: | chr10:61296757-61297286 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 30 |
Conread position: | 251-545 |
Cow position: | chr10:37040556-37040832 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 200 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-723 |
Cow position: | chr10:37060396-37060855 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 416, 14 |
Conread position: | 251-732 |
Cow position: | chr10:21486385-21486851 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-747 |
Cow position: | chr10:37769292-37769772 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 14 |
Conread position: | 251-749 |
Cow position: | chr10:1375006-1375488 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr10:10581122-10581625 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 14 |
Conread position: | 251-749 |
Cow position: | chr10:19143873-19143387 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr10:19511080-19511557 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr10:29847151-29846658 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 14 |
Conread position: | 251-749 |
Cow position: | chr10:38345907-38345411 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr10:38539024-38538546 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-749 |
Cow position: | chr10:39041839-39041354 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 14 |
Conread position: | 253-739 |
Cow position: | chr10:62409383-62408910 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 12 |
Conread position: | 254-739 |
Cow position: | chr10:22100712-22101183 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 11 |
Conread position: | 255-420 |
Cow position: | chr10:29633362-29633197 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 7, 106 |
Conread position: | 255-753 |
Cow position: | chr10:62216084-62216562 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 70 |
Conread position: | 255-759 |
Cow position: | chr10:60489127-60489621 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 16 |
Conread position: | 258-687 |
Cow position: | chr10:4499183-4499592 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 286 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 261-430 |
Cow position: | chr10:34685383-34685552 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 121 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 261-732 |
Cow position: | chr10:34318776-34318334 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 315 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 261-753 |
Cow position: | chr10:19839616-19840109 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 150 |
Conread position: | 261-753 |
Cow position: | chr10:55092555-55093067 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 153 |
Conread position: | 261-754 |
Cow position: | chr10:24299376-24298895 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 17 |
Conread position: | 261-754 |
Cow position: | chr10:25497838-25498308 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 152 |
Conread position: | 261-754 |
Cow position: | chr10:62777830-62778302 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 28 |
Conread position: | 265-752 |
Cow position: | chr10:29695723-29696192 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 78 |
Conread position: | 280-749 |
Cow position: | chr10:7283186-7282732 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 383, 90 |
Conread position: | 289-756 |
Cow position: | chr10:46190879-46191326 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 310 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 143, 112 |
Conread position: | 290-753 |
Cow position: | chr10:41876393-41876875 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 124 |
Conread position: | 299-749 |
Cow position: | chr10:123830-124261 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 46 |
Conread position: | 302-753 |
Cow position: | chr10:11686173-11685711 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 109 |
Conread position: | 310-756 |
Cow position: | chr10:38546698-38546264 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 55 |
Conread position: | 335-562 |
Cow position: | chr10:42736049-42736269 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 13, 43 |
Conread position: | 341-660 |
Cow position: | chr10:19715500-19715186 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 346-751 |
Cow position: | chr10:21901642-21901241 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 267 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 57, 18 |
Conread position: | 354-754 |
Cow position: | chr10:42682992-42683379 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 256 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 106, 76 |
Conread position: | 356-572 |
Cow position: | chr10:19497356-19497143 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 146 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 74, 115 |
Conread position: | 356-586 |
Cow position: | chr10:28641046-28641276 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 150 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 82, 115 |
Conread position: | 356-657 |
Cow position: | chr10:21466812-21467112 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 204 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 356-749 |
Cow position: | chr10:32577858-32578255 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 356-753 |
Cow position: | chr10:281063-280663 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 114 |
Conread position: | 356-753 |
Cow position: | chr10:4192656-4192261 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 114 |
Conread position: | 356-753 |
Cow position: | chr10:14803392-14803791 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 114 |
Conread position: | 356-753 |
Cow position: | chr10:21401108-21400715 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 67 |
Conread position: | 356-753 |
Cow position: | chr10:41157013-41157404 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 356-753 |
Cow position: | chr10:41566669-41567063 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 67 |
Conread position: | 356-753 |
Cow position: | chr10:47906339-47906734 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 105 |
Conread position: | 356-753 |
Cow position: | chr10:51953045-51952649 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 76 |
Conread position: | 356-753 |
Cow position: | chr10:57559990-57559592 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 361-753 |
Cow position: | chr10:39817782-39817394 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 65 |
Conread position: | 367-754 |
Cow position: | chr10:13423178-13422787 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 247 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 39, 28 |
Conread position: | 373-735 |
Cow position: | chr10:32063720-32064090 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 41 |
Conread position: | 401-758 |
Cow position: | chr10:39881670-39881314 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 236 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 10, 68 |
Conread position: | 402-602 |
Cow position: | chr10:183147-183345 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 142 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 147, 68 |
Conread position: | 402-753 |
Cow position: | chr10:25565640-25565289 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 72 |
Conread position: | 403-673 |
Cow position: | chr10:58377956-58377700 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 404-670 |
Cow position: | chr10:15862687-15862428 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 12, 69 |
Conread position: | 410-582 |
Cow position: | chr10:2123500-2123329 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 429-758 |
Cow position: | chr10:24978504-24978170 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 224 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 56, 39 |
Conread position: | 431-749 |
Cow position: | chr10:25359029-25359350 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 82 |
Conread position: | 431-754 |
Cow position: | chr10:276225-276550 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 37 |
Conread position: | 442-753 |
Cow position: | chr10:54059704-54059399 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 447-755 |
Cow position: | chr10:31523502-31523785 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 227 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 449-753 |
Cow position: | chr10:58596156-58596456 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 212 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 214, 62 |
Conread position: | 463-754 |
Cow position: | chr10:10478467-10478191 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 195, 73 |
Conread position: | 466-754 |
Cow position: | chr10:34685562-34685852 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 112 |
Conread position: | 470-603 |
Cow position: | chr10:1938171-1938035 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 472-754 |
Cow position: | chr10:42628347-42628617 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 206 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 484-753 |
Cow position: | chr10:21076047-21076317 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 184 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 97, 199 |
Conread position: | 495-750 |
Cow position: | chr10:29633162-29632908 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 529-754 |
Cow position: | chr10:42663964-42664179 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 218, 34 |
Conread position: | 539-710 |
Cow position: | chr10:50018319-50018147 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 138 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 571-754 |
Cow position: | chr10:20383768-20383587 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 99, 20 |
Conread position: | 603-754 |
Cow position: | chr10:13366050-13365894 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 640-753 |
Cow position: | chr10:65307963-65308080 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.