Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 239-753
Cow position: chr10:21741308-21740795 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 57

Conread position: 239-759
Cow position: chr10:57990508-57990002 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 26

Conread position: 243-739
Cow position: chr10:14859444-14859919 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 246-749
Cow position: chr10:32650202-32650684 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 19

Conread position: 246-753
Cow position: chr10:39179221-39179740 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 12

Conread position: 247-724
Cow position: chr10:49310009-49310463 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 107, 11

Conread position: 247-749
Cow position: chr10:8289431-8289934 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 18

Conread position: 248-616
Cow position: chr10:54126922-54127275 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 126

Conread position: 248-755
Cow position: chr10:61296757-61297286 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 251-545
Cow position: chr10:37040556-37040832 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 251-723
Cow position: chr10:37060396-37060855 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 14

Conread position: 251-732
Cow position: chr10:21486385-21486851 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-747
Cow position: chr10:37769292-37769772 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 14

Conread position: 251-749
Cow position: chr10:1375006-1375488 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr10:10581122-10581625 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 14

Conread position: 251-749
Cow position: chr10:19143873-19143387 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr10:19511080-19511557 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr10:29847151-29846658 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 14

Conread position: 251-749
Cow position: chr10:38345907-38345411 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr10:38539024-38538546 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-749
Cow position: chr10:39041839-39041354 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 14

Conread position: 253-739
Cow position: chr10:62409383-62408910 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 12

Conread position: 254-739
Cow position: chr10:22100712-22101183 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 11

Conread position: 255-420
Cow position: chr10:29633362-29633197 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 106

Conread position: 255-753
Cow position: chr10:62216084-62216562 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 70

Conread position: 255-759
Cow position: chr10:60489127-60489621 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 258-687
Cow position: chr10:4499183-4499592 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 0

Conread position: 261-430
Cow position: chr10:34685383-34685552 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 261-732
Cow position: chr10:34318776-34318334 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 261-753
Cow position: chr10:19839616-19840109 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 150

Conread position: 261-753
Cow position: chr10:55092555-55093067 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 153

Conread position: 261-754
Cow position: chr10:24299376-24298895 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 17

Conread position: 261-754
Cow position: chr10:25497838-25498308 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 261-754
Cow position: chr10:62777830-62778302 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 28

Conread position: 265-752
Cow position: chr10:29695723-29696192 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 78

Conread position: 280-749
Cow position: chr10:7283186-7282732 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 90

Conread position: 289-756
Cow position: chr10:46190879-46191326 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 310
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 143, 112

Conread position: 290-753
Cow position: chr10:41876393-41876875 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 299-749
Cow position: chr10:123830-124261 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 46

Conread position: 302-753
Cow position: chr10:11686173-11685711 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 109

Conread position: 310-756
Cow position: chr10:38546698-38546264 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 55

Conread position: 335-562
Cow position: chr10:42736049-42736269 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 43

Conread position: 341-660
Cow position: chr10:19715500-19715186 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 346-751
Cow position: chr10:21901642-21901241 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 18

Conread position: 354-754
Cow position: chr10:42682992-42683379 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 256
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 76

Conread position: 356-572
Cow position: chr10:19497356-19497143 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 115

Conread position: 356-586
Cow position: chr10:28641046-28641276 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 115

Conread position: 356-657
Cow position: chr10:21466812-21467112 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 0

Conread position: 356-749
Cow position: chr10:32577858-32578255 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 356-753
Cow position: chr10:281063-280663 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 114

Conread position: 356-753
Cow position: chr10:4192656-4192261 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 114

Conread position: 356-753
Cow position: chr10:14803392-14803791 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 114

Conread position: 356-753
Cow position: chr10:21401108-21400715 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 67

Conread position: 356-753
Cow position: chr10:41157013-41157404 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr10:41566669-41567063 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 67

Conread position: 356-753
Cow position: chr10:47906339-47906734 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 105

Conread position: 356-753
Cow position: chr10:51953045-51952649 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 76

Conread position: 356-753
Cow position: chr10:57559990-57559592 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 361-753
Cow position: chr10:39817782-39817394 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 65

Conread position: 367-754
Cow position: chr10:13423178-13422787 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 247
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 28

Conread position: 373-735
Cow position: chr10:32063720-32064090 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 401-758
Cow position: chr10:39881670-39881314 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 10, 68

Conread position: 402-602
Cow position: chr10:183147-183345 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 68

Conread position: 402-753
Cow position: chr10:25565640-25565289 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 72

Conread position: 403-673
Cow position: chr10:58377956-58377700 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 404-670
Cow position: chr10:15862687-15862428 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 69

Conread position: 410-582
Cow position: chr10:2123500-2123329 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 429-758
Cow position: chr10:24978504-24978170 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 39

Conread position: 431-749
Cow position: chr10:25359029-25359350 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 431-754
Cow position: chr10:276225-276550 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 37

Conread position: 442-753
Cow position: chr10:54059704-54059399 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 447-755
Cow position: chr10:31523502-31523785 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 449-753
Cow position: chr10:58596156-58596456 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 214, 62

Conread position: 463-754
Cow position: chr10:10478467-10478191 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 195, 73

Conread position: 466-754
Cow position: chr10:34685562-34685852 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 112

Conread position: 470-603
Cow position: chr10:1938171-1938035 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 472-754
Cow position: chr10:42628347-42628617 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 484-753
Cow position: chr10:21076047-21076317 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 199

Conread position: 495-750
Cow position: chr10:29633162-29632908 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 11

Conread position: 529-754
Cow position: chr10:42663964-42664179 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 218, 34

Conread position: 539-710
Cow position: chr10:50018319-50018147 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 571-754
Cow position: chr10:20383768-20383587 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 20

Conread position: 603-754
Cow position: chr10:13366050-13365894 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 640-753
Cow position: chr10:65307963-65308080 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.