Cow genome map


           Conread name:
           Lng1-LNG010103A02
        

               Conread position:
               239-753
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               239-759
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 26
               

               Conread position:
               243-739
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               246-749
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 19
               

               Conread position:
               246-753
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               247-724
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               247-749
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 18
               

               Conread position:
               248-616
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               248-755
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               251-545
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               251-723
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               416, 14
               

               Conread position:
               251-732
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 14
               

               Conread position:
               251-747
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 14
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               251-749
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               253-739
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 12
               

               Conread position:
               254-739
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 11
               

               Conread position:
               255-420
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 106
               

               Conread position:
               255-753
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 70
               

               Conread position:
               255-759
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               258-687
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               261-430
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-732
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               261-753
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 150
               

               Conread position:
               261-753
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 153
               

               Conread position:
               261-754
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 17
               

               Conread position:
               261-754
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 152
               

               Conread position:
               261-754
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 28
               

               Conread position:
               265-752
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 78
               

               Conread position:
               280-749
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 90
               

               Conread position:
               289-756
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               310
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               143, 112
               

               Conread position:
               290-753
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 124
               

               Conread position:
               299-749
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 46
               

               Conread position:
               302-753
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               310-756
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 55
               

               Conread position:
               335-562
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               341-660
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               346-751
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               354-754
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               356-572
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               356-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               82, 115
               

               Conread position:
               356-657
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               356-749
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 114
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 114
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 114
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 67
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 114
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 67
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 105
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 76
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 114
               

               Conread position:
               361-753
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 65
               

               Conread position:
               367-754
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               373-735
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               401-758
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               402-602
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 68
               

               Conread position:
               402-753
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               403-673
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               404-670
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 69
               

               Conread position:
               410-582
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               429-758
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               431-749
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               431-754
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 37
               

               Conread position:
               442-753
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               447-755
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               449-753
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               214, 62
               

               Conread position:
               463-754
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               195, 73
               

               Conread position:
               466-754
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 112
               

               Conread position:
               470-603
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               472-754
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               484-753
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               97, 199
               

               Conread position:
               495-750
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               529-754
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               218, 34
               

               Conread position:
               539-710
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               571-754
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               603-754
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               640-753
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.