Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 246-749 |
| Cow position: | chr12:25101681-25101185 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 246-755 |
| Cow position: | chr12:2281920-2282429 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 146 |
| Conread position: | 247-754 |
| Cow position: | chr12:21197213-21197708 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 251-495 |
| Cow position: | chr12:22121110-22121346 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 251-733 |
| Cow position: | chr12:252666-252195 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 14 |
| Conread position: | 251-739 |
| Cow position: | chr12:42860424-42859948 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr12:1401885-1402367 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr12:6407251-6406769 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 14 |
| Conread position: | 251-749 |
| Cow position: | chr12:8678727-8678246 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr12:22206349-22205870 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 14 |
| Conread position: | 251-760 |
| Cow position: | chr12:27933551-27933058 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 14 |
| Conread position: | 254-515 |
| Cow position: | chr12:9709085-9708819 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 158 |
| Conread position: | 261-537 |
| Cow position: | chr12:45261052-45261331 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 175, 23 |
| Conread position: | 262-731 |
| Cow position: | chr12:2840191-2839737 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 281-749 |
| Cow position: | chr12:11097660-11098118 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 89 |
| Conread position: | 307-755 |
| Cow position: | chr12:20998683-20998237 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 60 |
| Conread position: | 346-759 |
| Cow position: | chr12:15951773-15951375 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 49 |
| Conread position: | 356-628 |
| Cow position: | chr12:21883506-21883779 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 82, 226 |
| Conread position: | 356-749 |
| Cow position: | chr12:21426187-21426570 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 356-753 |
| Cow position: | chr12:21207179-21207576 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr12:21255167-21254774 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 116 |
| Conread position: | 356-753 |
| Cow position: | chr12:26141295-26141695 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 114 |
| Conread position: | 356-753 |
| Cow position: | chr12:32653029-32653426 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 112 |
| Conread position: | 356-753 |
| Cow position: | chr12:37558041-37558436 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr12:43031892-43031501 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 356-754 |
| Cow position: | chr12:3360395-3360785 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 395-671 |
| Cow position: | chr12:26947745-26947459 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 404-720 |
| Cow position: | chr12:3630724-3631026 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 302, 22 |
| Conread position: | 418-749 |
| Cow position: | chr12:22026303-22026628 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 286, 35 |
| Conread position: | 439-731 |
| Cow position: | chr12:16293489-16293781 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 439-732 |
| Cow position: | chr12:21941344-21941635 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 463-754 |
| Cow position: | chr12:2386-2680 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 463-754 |
| Cow position: | chr12:8310772-8311067 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 463-754 |
| Cow position: | chr12:14663022-14662730 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 101 |
| Conread position: | 463-754 |
| Cow position: | chr12:21901541-21901828 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 137 |
| Conread position: | 463-754 |
| Cow position: | chr12:48404638-48404927 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 490-739 |
| Cow position: | chr12:28766401-28766150 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 501-671 |
| Cow position: | chr12:42420784-42420615 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 553-754 |
| Cow position: | chr12:45261285-45261496 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 580-739 |
| Cow position: | chr12:601346-601184 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.