Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 237-754 |
| Cow position: | chr14:43552450-43552959 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 244, 66 |
| Conread position: | 242-761 |
| Cow position: | chr14:13272288-13272803 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 246-670 |
| Cow position: | chr14:44551084-44551506 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 181 |
| Conread position: | 246-715 |
| Cow position: | chr14:41406879-41407346 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 246-754 |
| Cow position: | chr14:14422965-14422489 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 247-749 |
| Cow position: | chr14:11155111-11154623 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 18 |
| Conread position: | 249-759 |
| Cow position: | chr14:35928220-35928719 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 79 |
| Conread position: | 251-739 |
| Cow position: | chr14:22032632-22032160 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 13 |
| Conread position: | 251-749 |
| Cow position: | chr14:5528113-5528593 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr14:7471422-7471906 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:13302074-13302562 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:16274251-16273764 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:17002002-17001523 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:17684449-17684927 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:20781505-20781988 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:28994812-28994323 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 251-749 |
| Cow position: | chr14:48255266-48254777 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 14 |
| Conread position: | 251-759 |
| Cow position: | chr14:19329220-19328727 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-759 |
| Cow position: | chr14:37222948-37223444 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 254-393 |
| Cow position: | chr14:44856364-44856223 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 254-732 |
| Cow position: | chr14:45916428-45916913 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 254-755 |
| Cow position: | chr14:46083676-46084162 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 255-728 |
| Cow position: | chr14:48703655-48704109 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 260-746 |
| Cow position: | chr14:30597352-30596852 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 261-393 |
| Cow position: | chr14:42403950-42404082 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-753 |
| Cow position: | chr14:749598-750106 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 153 |
| Conread position: | 261-754 |
| Cow position: | chr14:35388083-35387593 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 181 |
| Conread position: | 261-755 |
| Cow position: | chr14:23691163-23690687 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 79 |
| Conread position: | 266-753 |
| Cow position: | chr14:44376485-44376971 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 267-658 |
| Cow position: | chr14:50133964-50134348 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 267-752 |
| Cow position: | chr14:40338755-40339242 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 268-754 |
| Cow position: | chr14:44685090-44685585 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 275-656 |
| Cow position: | chr14:2283028-2283424 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 212 |
| Conread position: | 289-732 |
| Cow position: | chr14:11467684-11468114 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 6 |
| Conread position: | 290-754 |
| Cow position: | chr14:45833247-45833697 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 50 |
| Conread position: | 299-753 |
| Cow position: | chr14:38533214-38532758 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 75 |
| Conread position: | 300-742 |
| Cow position: | chr14:22018478-22018930 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 173 |
| Conread position: | 308-755 |
| Cow position: | chr14:41754975-41755399 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 310-753 |
| Cow position: | chr14:45159955-45160400 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 158 |
| Conread position: | 310-756 |
| Cow position: | chr14:44225514-44225948 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 335-739 |
| Cow position: | chr14:50109692-50110103 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 356-594 |
| Cow position: | chr14:10561769-10562006 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 356-595 |
| Cow position: | chr14:33394666-33394428 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 356-744 |
| Cow position: | chr14:30585799-30585412 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 112 |
| Conread position: | 356-753 |
| Cow position: | chr14:17492314-17491920 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 356-753 |
| Cow position: | chr14:45672906-45672508 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 114 |
| Conread position: | 356-754 |
| Cow position: | chr14:45205201-45205608 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 367-754 |
| Cow position: | chr14:47921173-47921543 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 183, 56 |
| Conread position: | 391-732 |
| Cow position: | chr14:16920513-16920170 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 391-754 |
| Cow position: | chr14:45712805-45712438 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 401-713 |
| Cow position: | chr14:14309874-14309566 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 259, 10 |
| Conread position: | 401-739 |
| Cow position: | chr14:45079723-45080056 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 31 |
| Conread position: | 401-753 |
| Cow position: | chr14:31607735-31607384 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 403-771 |
| Cow position: | chr14:40170495-40170128 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 160, 65 |
| Conread position: | 405-732 |
| Cow position: | chr14:46669513-46669825 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 150 |
| Conread position: | 418-753 |
| Cow position: | chr14:23256556-23256896 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 52 |
| Conread position: | 424-753 |
| Cow position: | chr14:29048689-29048365 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 434-658 |
| Cow position: | chr14:1499969-1500192 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 439-753 |
| Cow position: | chr14:9044785-9045102 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 33 |
| Conread position: | 442-696 |
| Cow position: | chr14:41670955-41671213 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 442-754 |
| Cow position: | chr14:13660769-13660452 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 444-662 |
| Cow position: | chr14:15277634-15277409 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 452-732 |
| Cow position: | chr14:44616524-44616803 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 171 |
| Conread position: | 457-754 |
| Cow position: | chr14:45767242-45767543 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 463-701 |
| Cow position: | chr14:41085564-41085328 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 463-754 |
| Cow position: | chr14:23529749-23529473 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 463-754 |
| Cow position: | chr14:36967501-36967793 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 239 |
| Conread position: | 463-754 |
| Cow position: | chr14:44856182-44855888 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 463-754 |
| Cow position: | chr14:45850471-45850762 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-755 |
| Cow position: | chr14:47623814-47624107 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 466-754 |
| Cow position: | chr14:44130174-44130457 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 473-710 |
| Cow position: | chr14:13778117-13778357 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 475-754 |
| Cow position: | chr14:7831279-7831001 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 44 |
| Conread position: | 509-750 |
| Cow position: | chr14:44421847-44422088 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 138 |
| Conread position: | 512-753 |
| Cow position: | chr14:33394481-33394239 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 152, 17 |
| Conread position: | 538-754 |
| Cow position: | chr14:42151642-42151861 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 564-755 |
| Cow position: | chr14:12608556-12608746 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 594-756 |
| Cow position: | chr14:13622236-13622073 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 640-753 |
| Cow position: | chr14:23901381-23901264 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.