Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 236-749
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 29

Conread position: 241-613
Cow position:
Alignm length: 373
Alignm identity: 238
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 241-753
Cow position:
Alignm length: 529
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 243

Conread position: 245-739
Cow position:
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 246-710
Cow position:
Alignm length: 474
Alignm identity: 313
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 33

Conread position: 246-741
Cow position:
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 218

Conread position: 246-749
Cow position:
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 246-759
Cow position:
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 124

Conread position: 247-749
Cow position:
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 18

Conread position: 247-760
Cow position:
Alignm length: 517
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 18

Conread position: 248-593
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 225

Conread position: 248-755
Cow position:
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 23

Conread position: 250-534
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 251-545
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 251-634
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-748
Cow position:
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 14

Conread position: 251-749
Cow position:
Alignm length: 501
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 14

Conread position: 251-749
Cow position:
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 251-749
Cow position:
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position:
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 14

Conread position: 251-750
Cow position:
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-754
Cow position:
Alignm length: 505
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 251-755
Cow position:
Alignm length: 509
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 14

Conread position: 251-759
Cow position:
Alignm length: 512
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-768
Cow position:
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 254-749
Cow position:
Alignm length: 496
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 261-753
Cow position:
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 160

Conread position: 261-753
Cow position:
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 153

Conread position: 261-753
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 17

Conread position: 261-754
Cow position:
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 211

Conread position: 261-755
Cow position:
Alignm length: 498
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 135

Conread position: 261-759
Cow position:
Alignm length: 504
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 109

Conread position: 261-759
Cow position:
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 79

Conread position: 271-588
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 274, 88

Conread position: 271-748
Cow position:
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 147

Conread position: 280-749
Cow position:
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 62

Conread position: 290-727
Cow position:
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 131

Conread position: 294-770
Cow position:
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 138

Conread position: 308-749
Cow position:
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 62

Conread position: 308-760
Cow position:
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 324-754
Cow position:
Alignm length: 437
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 334-747
Cow position:
Alignm length: 417
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 9

Conread position: 356-753
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 117

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 114

Conread position: 356-753
Cow position:
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 115

Conread position: 356-753
Cow position:
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 40

Conread position: 356-754
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 30

Conread position: 356-767
Cow position:
Alignm length: 416
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 357-753
Cow position:
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 86

Conread position: 360-749
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 371-732
Cow position:
Alignm length: 370
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 53

Conread position: 375-749
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 57

Conread position: 387-758
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 391-754
Cow position:
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 19

Conread position: 401-759
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 148, 60

Conread position: 402-752
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 167, 66

Conread position: 402-754
Cow position:
Alignm length: 366
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 136

Conread position: 407-754
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 8

Conread position: 410-670
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 253, 124

Conread position: 410-754
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 13

Conread position: 426-758
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 42

Conread position: 430-730
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 229, 38

Conread position: 431-754
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 39

Conread position: 434-754
Cow position:
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 34

Conread position: 442-749
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 444-739
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 447-755
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 22

Conread position: 463-744
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 463-750
Cow position:
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 176

Conread position: 466-758
Cow position:
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 140

Conread position: 467-631
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 467-749
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 468-749
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 470-767
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 290, 68

Conread position: 502-736
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 51

Conread position: 548-749
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 28

Conread position: 552-749
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 557-754
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 173, 10

Conread position: 592-753
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 5

Conread position: 600-754
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 64

Conread position: 609-755
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.