Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 237-770 |
| Cow position: | chr19:685316-685842 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 246-551 |
| Cow position: | chr19:562229-561929 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 145 |
| Conread position: | 246-762 |
| Cow position: | chr19:171694-172199 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 25 |
| Conread position: | 250-597 |
| Cow position: | chr19:27053341-27053014 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 251-655 |
| Cow position: | chr19:33872733-33873117 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-739 |
| Cow position: | chr19:4384967-4385450 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 251-749 |
| Cow position: | chr19:33941106-33941587 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr19:39390016-39390492 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr19:55078239-55078721 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-752 |
| Cow position: | chr19:28582145-28581676 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 13 |
| Conread position: | 251-759 |
| Cow position: | chr19:40852941-40852445 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 258-753 |
| Cow position: | chr19:52152782-52152281 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 227 |
| Conread position: | 258-754 |
| Cow position: | chr19:4252854-4252378 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 196 |
| Conread position: | 261-691 |
| Cow position: | chr19:36476859-36477271 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 402, 99 |
| Conread position: | 261-753 |
| Cow position: | chr19:32193048-32193557 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 153 |
| Conread position: | 261-754 |
| Cow position: | chr19:4533257-4532767 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 261-754 |
| Cow position: | chr19:32223921-32223459 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 261-755 |
| Cow position: | chr19:33917-34401 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 261-766 |
| Cow position: | chr19:76745-76248 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 134 |
| Conread position: | 267-754 |
| Cow position: | chr19:29209076-29209541 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 62 |
| Conread position: | 268-605 |
| Cow position: | chr19:544403-544062 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 281-691 |
| Cow position: | chr19:6552925-6553309 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 382, 118 |
| Conread position: | 290-744 |
| Cow position: | chr19:772105-772569 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 124 |
| Conread position: | 291-749 |
| Cow position: | chr19:203490-203938 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 79 |
| Conread position: | 299-749 |
| Cow position: | chr19:10672771-10672331 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 71 |
| Conread position: | 310-753 |
| Cow position: | chr19:28592802-28593256 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 167 |
| Conread position: | 310-754 |
| Cow position: | chr19:30754715-30755158 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 325-759 |
| Cow position: | chr19:35376113-35376543 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 332-754 |
| Cow position: | chr19:260994-261416 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 335-758 |
| Cow position: | chr19:40888088-40887661 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 336-754 |
| Cow position: | chr19:378313-377895 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 88 |
| Conread position: | 356-753 |
| Cow position: | chr19:37487-37876 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 356-753 |
| Cow position: | chr19:7341652-7342048 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 114 |
| Conread position: | 356-753 |
| Cow position: | chr19:32212480-32212090 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr19:32244252-32244664 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 356-753 |
| Cow position: | chr19:43143299-43143696 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 77 |
| Conread position: | 356-754 |
| Cow position: | chr19:547972-548367 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 371-720 |
| Cow position: | chr19:7450399-7450056 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 382-732 |
| Cow position: | chr19:32238249-32237899 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 396-754 |
| Cow position: | chr19:20111605-20111244 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 401-754 |
| Cow position: | chr19:30371903-30372262 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 29 |
| Conread position: | 405-771 |
| Cow position: | chr19:32183815-32183452 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 158, 67 |
| Conread position: | 431-677 |
| Cow position: | chr19:350919-350666 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 133, 40 |
| Conread position: | 431-756 |
| Cow position: | chr19:31341379-31341688 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 433-753 |
| Cow position: | chr19:35978925-35979245 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 447-770 |
| Cow position: | chr19:171071-170743 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 5 |
| Conread position: | 463-624 |
| Cow position: | chr19:801677-801838 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-735 |
| Cow position: | chr19:39688236-39688504 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 89 |
| Conread position: | 463-749 |
| Cow position: | chr19:7487999-7488288 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 276 |
| Conread position: | 463-754 |
| Cow position: | chr19:416335-416633 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 466-750 |
| Cow position: | chr19:32665222-32665506 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 233 |
| Conread position: | 466-754 |
| Cow position: | chr19:1031803-1032086 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 531-749 |
| Cow position: | chr19:893848-893638 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 562-753 |
| Cow position: | chr19:39546414-39546607 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 600-759 |
| Cow position: | chr19:27052940-27052784 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 5 |
| Conread position: | 620-755 |
| Cow position: | chr19:28376374-28376512 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.