Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 241-754 |
| Cow position: | chr20:2791927-2791409 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 245-755 |
| Cow position: | chr20:15064189-15064707 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 246-749 |
| Cow position: | chr20:7117029-7116537 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 19 |
| Conread position: | 247-615 |
| Cow position: | chr20:15291491-15291843 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 251-606 |
| Cow position: | chr20:35118698-35119033 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-671 |
| Cow position: | chr20:8005066-8004662 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-739 |
| Cow position: | chr20:30683785-30684261 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 251-744 |
| Cow position: | chr20:18316140-18315658 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 13 |
| Conread position: | 251-749 |
| Cow position: | chr20:13762359-13762834 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr20:23798323-23798814 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr20:27868644-27869129 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 14 |
| Conread position: | 251-759 |
| Cow position: | chr20:5534394-5534881 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-759 |
| Cow position: | chr20:23470214-23469717 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 14 |
| Conread position: | 253-749 |
| Cow position: | chr20:21913787-21914258 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 12 |
| Conread position: | 253-754 |
| Cow position: | chr20:25851537-25851053 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 12 |
| Conread position: | 255-750 |
| Cow position: | chr20:10103097-10102616 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 256-756 |
| Cow position: | chr20:8994359-8993878 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 265, 56 |
| Conread position: | 258-754 |
| Cow position: | chr20:3252679-3252196 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 114 |
| Conread position: | 261-422 |
| Cow position: | chr20:8313963-8313802 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-538 |
| Cow position: | chr20:3032441-3032719 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 215 |
| Conread position: | 261-632 |
| Cow position: | chr20:13681625-13681279 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 261-754 |
| Cow position: | chr20:28593191-28593685 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 135 |
| Conread position: | 271-725 |
| Cow position: | chr20:11276819-11276388 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 154 |
| Conread position: | 299-739 |
| Cow position: | chr20:21393059-21393492 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 310-749 |
| Cow position: | chr20:28160270-28160712 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 330-650 |
| Cow position: | chr20:29947697-29948016 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 334-749 |
| Cow position: | chr20:12439243-12438829 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 356-658 |
| Cow position: | chr20:31123943-31124244 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 356-662 |
| Cow position: | chr20:822295-822593 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 293, 114 |
| Conread position: | 356-753 |
| Cow position: | chr20:19437502-19437895 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 114 |
| Conread position: | 402-753 |
| Cow position: | chr20:20905598-20905251 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 171, 70 |
| Conread position: | 402-767 |
| Cow position: | chr20:22206119-22206501 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 148, 32 |
| Conread position: | 444-757 |
| Cow position: | chr20:10846450-10846138 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 26 |
| Conread position: | 445-753 |
| Cow position: | chr20:5561089-5560778 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 25 |
| Conread position: | 449-749 |
| Cow position: | chr20:15098238-15097946 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 449-754 |
| Cow position: | chr20:4800014-4799714 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 456-719 |
| Cow position: | chr20:24614187-24614448 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 457-753 |
| Cow position: | chr20:22718043-22717759 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 463-749 |
| Cow position: | chr20:28565957-28565664 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 463-754 |
| Cow position: | chr20:5483837-5484129 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 51 |
| Conread position: | 463-759 |
| Cow position: | chr20:8313787-8313494 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 464-754 |
| Cow position: | chr20:3270367-3270641 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 466-592 |
| Cow position: | chr20:19005980-19005857 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 466-728 |
| Cow position: | chr20:3032584-3032840 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 475-770 |
| Cow position: | chr20:9954300-9954029 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 504-749 |
| Cow position: | chr20:35119257-35119505 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 235 |
| Conread position: | 556-749 |
| Cow position: | chr20:35119061-35119256 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 182 |
| Conread position: | 561-753 |
| Cow position: | chr20:19192387-19192191 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 585-753 |
| Cow position: | chr20:11679345-11679173 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.