Cow genome map
Conread name: | Lng1-LNG010103A02 |
Conread position: | 240-755 |
Cow position: | chr22:1321007-1321496 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 105 |
Conread position: | 242-744 |
Cow position: | chr22:15850716-15851207 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 26 |
Conread position: | 243-565 |
Cow position: | chr22:44474699-44475005 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 244-758 |
Cow position: | chr22:7276906-7277411 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 35 |
Conread position: | 251-557 |
Cow position: | chr22:27386998-27386703 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 208 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-662 |
Cow position: | chr22:526517-526121 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 275 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-730 |
Cow position: | chr22:21588731-21589192 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-732 |
Cow position: | chr22:561306-560839 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 405, 14 |
Conread position: | 251-749 |
Cow position: | chr22:17329344-17328861 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr22:19144305-19143821 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 14 |
Conread position: | 251-749 |
Cow position: | chr22:31312737-31313219 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-749 |
Cow position: | chr22:34167713-34168210 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr22:39470124-39469641 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 421, 14 |
Conread position: | 251-749 |
Cow position: | chr22:42990569-42991050 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 17 |
Conread position: | 251-749 |
Cow position: | chr22:44933372-44933858 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 13 |
Conread position: | 251-753 |
Cow position: | chr22:44456705-44457199 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 14 |
Conread position: | 251-754 |
Cow position: | chr22:3307334-3306849 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 207 |
Conread position: | 251-754 |
Cow position: | chr22:8136802-8136313 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 14 |
Conread position: | 254-753 |
Cow position: | chr22:1294106-1293614 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 11 |
Conread position: | 256-575 |
Cow position: | chr22:44609027-44609340 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 212 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 245, 169 |
Conread position: | 256-700 |
Cow position: | chr22:45880720-45880309 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 259-753 |
Cow position: | chr22:5933599-5933102 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 27 |
Conread position: | 260-753 |
Cow position: | chr22:1878205-1878675 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 9 |
Conread position: | 261-753 |
Cow position: | chr22:693010-693515 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 57 |
Conread position: | 261-753 |
Cow position: | chr22:35672988-35672472 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 153 |
Conread position: | 261-753 |
Cow position: | chr22:44489263-44489770 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 221 |
Conread position: | 261-754 |
Cow position: | chr22:1285535-1285048 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 24 |
Conread position: | 261-754 |
Cow position: | chr22:13772183-13772664 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 134 |
Conread position: | 261-754 |
Cow position: | chr22:36736181-36736646 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 75 |
Conread position: | 261-755 |
Cow position: | chr22:37073757-37073297 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 41 |
Conread position: | 269-702 |
Cow position: | chr22:36534547-36534132 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 121 |
Conread position: | 290-605 |
Cow position: | chr22:36180557-36180876 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 227 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 62 |
Conread position: | 290-754 |
Cow position: | chr22:46585890-46585428 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 366, 59 |
Conread position: | 299-755 |
Cow position: | chr22:37131095-37131534 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 97 |
Conread position: | 308-755 |
Cow position: | chr22:1271060-1270626 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 10 |
Conread position: | 310-533 |
Cow position: | chr22:48004107-48004327 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 149 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 177, 85 |
Conread position: | 311-755 |
Cow position: | chr22:6504209-6503780 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 114 |
Conread position: | 326-634 |
Cow position: | chr22:12732602-12732311 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 219 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 350-740 |
Cow position: | chr22:11030466-11030829 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 272 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 355-753 |
Cow position: | chr22:16199977-16200369 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 395, 115 |
Conread position: | 356-744 |
Cow position: | chr22:10910371-10909984 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 117 |
Conread position: | 356-753 |
Cow position: | chr22:6984738-6985138 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 356-753 |
Cow position: | chr22:10546134-10546527 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 356-753 |
Cow position: | chr22:18476277-18475884 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 356-753 |
Cow position: | chr22:24949313-24949713 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 356-753 |
Cow position: | chr22:27310293-27309890 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 356-753 |
Cow position: | chr22:37264937-37265337 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 72 |
Conread position: | 356-753 |
Cow position: | chr22:44370130-44369737 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 394, 114 |
Conread position: | 356-754 |
Cow position: | chr22:327664-327273 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 49 |
Conread position: | 357-529 |
Cow position: | chr22:15314872-15314701 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 358-753 |
Cow position: | chr22:3278864-3278470 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 112 |
Conread position: | 358-753 |
Cow position: | chr22:5233811-5233422 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 112 |
Conread position: | 364-703 |
Cow position: | chr22:5307608-5307950 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 0 |
Conread position: | 381-749 |
Cow position: | chr22:31335522-31335155 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 52 |
Conread position: | 387-754 |
Cow position: | chr22:5672253-5672620 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 28 |
Conread position: | 391-601 |
Cow position: | chr22:40380715-40380926 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 10, 23 |
Conread position: | 391-754 |
Cow position: | chr22:39882653-39882293 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 22 |
Conread position: | 391-754 |
Cow position: | chr22:46852861-46853225 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 254 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 10, 23 |
Conread position: | 399-754 |
Cow position: | chr22:1318920-1319280 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 70 |
Conread position: | 399-757 |
Cow position: | chr22:37067389-37067028 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 402-749 |
Cow position: | chr22:44395313-44395659 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 9 |
Conread position: | 402-754 |
Cow position: | chr22:10077219-10076869 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 32 |
Conread position: | 403-732 |
Cow position: | chr22:33350698-33351030 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 227 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 160, 69 |
Conread position: | 410-755 |
Cow position: | chr22:46636160-46635815 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 50 |
Conread position: | 413-616 |
Cow position: | chr22:18930113-18930320 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 25, 62 |
Conread position: | 418-755 |
Cow position: | chr22:44353402-44353063 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 50 |
Conread position: | 429-704 |
Cow position: | chr22:41420128-41419855 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 41 |
Conread position: | 430-749 |
Cow position: | chr22:27386891-27386553 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 231 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 13, 28 |
Conread position: | 430-758 |
Cow position: | chr22:309281-309603 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 171, 38 |
Conread position: | 435-757 |
Cow position: | chr22:42747091-42747402 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 213 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 17 |
Conread position: | 457-749 |
Cow position: | chr22:36861947-36861652 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 461-758 |
Cow position: | chr22:41474740-41474449 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 201 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 200, 10 |
Conread position: | 462-702 |
Cow position: | chr22:42771136-42771381 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 176 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 462-759 |
Cow position: | chr22:18816793-18816493 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 150 |
Conread position: | 463-754 |
Cow position: | chr22:118226-117932 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 0 |
Conread position: | 476-755 |
Cow position: | chr22:158312-158018 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 482-754 |
Cow position: | chr22:32485719-32485453 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 494-751 |
Cow position: | chr22:9657944-9658197 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 502-753 |
Cow position: | chr22:4065269-4065524 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 188 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 161, 0 |
Conread position: | 564-755 |
Cow position: | chr22:34598368-34598559 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 81, 54 |
Conread position: | 606-753 |
Cow position: | chr22:27283781-27283932 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 645-754 |
Cow position: | chr22:13917278-13917386 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.