Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 240-755
Cow position: chr22:1321007-1321496 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 105

Conread position: 242-744
Cow position: chr22:15850716-15851207 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 26

Conread position: 243-565
Cow position: chr22:44474699-44475005 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 20

Conread position: 244-758
Cow position: chr22:7276906-7277411 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 251-557
Cow position: chr22:27386998-27386703 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 251-662
Cow position: chr22:526517-526121 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 251-730
Cow position: chr22:21588731-21589192 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-732
Cow position: chr22:561306-560839 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 14

Conread position: 251-749
Cow position: chr22:17329344-17328861 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr22:19144305-19143821 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 14

Conread position: 251-749
Cow position: chr22:31312737-31313219 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-749
Cow position: chr22:34167713-34168210 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr22:39470124-39469641 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 14

Conread position: 251-749
Cow position: chr22:42990569-42991050 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 17

Conread position: 251-749
Cow position: chr22:44933372-44933858 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 13

Conread position: 251-753
Cow position: chr22:44456705-44457199 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 14

Conread position: 251-754
Cow position: chr22:3307334-3306849 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 207

Conread position: 251-754
Cow position: chr22:8136802-8136313 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 14

Conread position: 254-753
Cow position: chr22:1294106-1293614 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 11

Conread position: 256-575
Cow position: chr22:44609027-44609340 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 245, 169

Conread position: 256-700
Cow position: chr22:45880720-45880309 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 259-753
Cow position: chr22:5933599-5933102 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 260-753
Cow position: chr22:1878205-1878675 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 9

Conread position: 261-753
Cow position: chr22:693010-693515 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 261-753
Cow position: chr22:35672988-35672472 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 153

Conread position: 261-753
Cow position: chr22:44489263-44489770 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 221

Conread position: 261-754
Cow position: chr22:1285535-1285048 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 24

Conread position: 261-754
Cow position: chr22:13772183-13772664 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 134

Conread position: 261-754
Cow position: chr22:36736181-36736646 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 75

Conread position: 261-755
Cow position: chr22:37073757-37073297 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 41

Conread position: 269-702
Cow position: chr22:36534547-36534132 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 121

Conread position: 290-605
Cow position: chr22:36180557-36180876 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 55, 62

Conread position: 290-754
Cow position: chr22:46585890-46585428 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 59

Conread position: 299-755
Cow position: chr22:37131095-37131534 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 97

Conread position: 308-755
Cow position: chr22:1271060-1270626 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 10

Conread position: 310-533
Cow position: chr22:48004107-48004327 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 85

Conread position: 311-755
Cow position: chr22:6504209-6503780 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 114

Conread position: 326-634
Cow position: chr22:12732602-12732311 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 350-740
Cow position: chr22:11030466-11030829 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 36

Conread position: 355-753
Cow position: chr22:16199977-16200369 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 115

Conread position: 356-744
Cow position: chr22:10910371-10909984 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 117

Conread position: 356-753
Cow position: chr22:6984738-6985138 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr22:10546134-10546527 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 356-753
Cow position: chr22:18476277-18475884 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 356-753
Cow position: chr22:24949313-24949713 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr22:27310293-27309890 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 356-753
Cow position: chr22:37264937-37265337 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 72

Conread position: 356-753
Cow position: chr22:44370130-44369737 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 114

Conread position: 356-754
Cow position: chr22:327664-327273 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 49

Conread position: 357-529
Cow position: chr22:15314872-15314701 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 358-753
Cow position: chr22:3278864-3278470 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 112

Conread position: 358-753
Cow position: chr22:5233811-5233422 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 112

Conread position: 364-703
Cow position: chr22:5307608-5307950 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 381-749
Cow position: chr22:31335522-31335155 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 52

Conread position: 387-754
Cow position: chr22:5672253-5672620 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 391-601
Cow position: chr22:40380715-40380926 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 23

Conread position: 391-754
Cow position: chr22:39882653-39882293 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 391-754
Cow position: chr22:46852861-46853225 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 23

Conread position: 399-754
Cow position: chr22:1318920-1319280 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 399-757
Cow position: chr22:37067389-37067028 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 402-749
Cow position: chr22:44395313-44395659 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 9

Conread position: 402-754
Cow position: chr22:10077219-10076869 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 403-732
Cow position: chr22:33350698-33351030 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 160, 69

Conread position: 410-755
Cow position: chr22:46636160-46635815 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 413-616
Cow position: chr22:18930113-18930320 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 62

Conread position: 418-755
Cow position: chr22:44353402-44353063 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 50

Conread position: 429-704
Cow position: chr22:41420128-41419855 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 41

Conread position: 430-749
Cow position: chr22:27386891-27386553 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 28

Conread position: 430-758
Cow position: chr22:309281-309603 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 171, 38

Conread position: 435-757
Cow position: chr22:42747091-42747402 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 17

Conread position: 457-749
Cow position: chr22:36861947-36861652 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 461-758
Cow position: chr22:41474740-41474449 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 200, 10

Conread position: 462-702
Cow position: chr22:42771136-42771381 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 194, 0

Conread position: 462-759
Cow position: chr22:18816793-18816493 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 150

Conread position: 463-754
Cow position: chr22:118226-117932 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 476-755
Cow position: chr22:158312-158018 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 482-754
Cow position: chr22:32485719-32485453 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 494-751
Cow position: chr22:9657944-9658197 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 60

Conread position: 502-753
Cow position: chr22:4065269-4065524 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 161, 0

Conread position: 564-755
Cow position: chr22:34598368-34598559 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 54

Conread position: 606-753
Cow position: chr22:27283781-27283932 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 645-754
Cow position: chr22:13917278-13917386 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.