Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 223-754 |
| Cow position: | chr23:4276330-4276838 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 244-732 |
| Cow position: | chr23:19333022-19332537 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 317 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 246-758 |
| Cow position: | chr23:2339791-2340290 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 338 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 250-674 |
| Cow position: | chr23:3491110-3490711 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 251-739 |
| Cow position: | chr23:2715731-2716220 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 251-747 |
| Cow position: | chr23:15220500-15220021 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 13 |
| Conread position: | 251-748 |
| Cow position: | chr23:15176450-15176952 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 7 |
| Conread position: | 251-749 |
| Cow position: | chr23:3882299-3881820 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr23:4641227-4640746 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr23:15525016-15525488 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr23:27398899-27399382 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 14 |
| Conread position: | 251-749 |
| Cow position: | chr23:28912806-28913292 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 13 |
| Conread position: | 251-749 |
| Cow position: | chr23:36031977-36031493 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 14 |
| Conread position: | 251-759 |
| Cow position: | chr23:19488925-19489426 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-766 |
| Cow position: | chr23:11777881-11778380 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 254-749 |
| Cow position: | chr23:2027729-2027240 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 11 |
| Conread position: | 255-452 |
| Cow position: | chr23:8981413-8981219 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 258-755 |
| Cow position: | chr23:1025655-1025176 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 63 |
| Conread position: | 261-452 |
| Cow position: | chr23:2045440-2045629 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 261-753 |
| Cow position: | chr23:28216661-28217174 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 228 |
| Conread position: | 261-754 |
| Cow position: | chr23:989226-988757 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 29 |
| Conread position: | 261-755 |
| Cow position: | chr23:4509498-4509985 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 128 |
| Conread position: | 261-769 |
| Cow position: | chr23:31595769-31595279 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 170 |
| Conread position: | 280-739 |
| Cow position: | chr23:22147857-22147389 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 72 |
| Conread position: | 289-754 |
| Cow position: | chr23:16617415-16616965 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 108 |
| Conread position: | 292-739 |
| Cow position: | chr23:1140992-1141425 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 300-605 |
| Cow position: | chr23:2756936-2757233 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 308-749 |
| Cow position: | chr23:4815526-4815951 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 62 |
| Conread position: | 308-754 |
| Cow position: | chr23:4433893-4434348 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 334-739 |
| Cow position: | chr23:2796095-2795693 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 26 |
| Conread position: | 356-661 |
| Cow position: | chr23:14975278-14974981 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 356-753 |
| Cow position: | chr23:4359321-4359713 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 111 |
| Conread position: | 356-753 |
| Cow position: | chr23:19951101-19950700 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 116 |
| Conread position: | 356-753 |
| Cow position: | chr23:20301695-20302098 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 359-752 |
| Cow position: | chr23:34174675-34175065 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 369-662 |
| Cow position: | chr23:14966477-14966184 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 391-754 |
| Cow position: | chr23:5875253-5874891 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 394-731 |
| Cow position: | chr23:19017231-19017561 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 397-754 |
| Cow position: | chr23:3013157-3013529 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 401-719 |
| Cow position: | chr23:31652308-31652019 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 402-755 |
| Cow position: | chr23:22876098-22875750 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 88 |
| Conread position: | 439-754 |
| Cow position: | chr23:19449589-19449906 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 110, 241 |
| Conread position: | 444-749 |
| Cow position: | chr23:967776-967467 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 24 |
| Conread position: | 447-756 |
| Cow position: | chr23:1330711-1330404 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 457-732 |
| Cow position: | chr23:7273245-7273516 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 86 |
| Conread position: | 463-753 |
| Cow position: | chr23:2574155-2574448 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 118 |
| Conread position: | 463-754 |
| Cow position: | chr23:2765778-2765495 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 123 |
| Conread position: | 463-754 |
| Cow position: | chr23:5779496-5779201 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 284 |
| Conread position: | 463-754 |
| Cow position: | chr23:16481761-16481470 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 127 |
| Conread position: | 469-749 |
| Cow position: | chr23:30636706-30636423 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 480-753 |
| Cow position: | chr23:31446421-31446698 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 496-653 |
| Cow position: | chr23:6469652-6469495 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 506-754 |
| Cow position: | chr23:8980856-8980609 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 514-753 |
| Cow position: | chr23:2313595-2313354 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 516-754 |
| Cow position: | chr23:2725505-2725740 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 570-753 |
| Cow position: | chr23:16616168-16615986 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 595-749 |
| Cow position: | chr23:4888402-4888559 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.