Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 229-749 |
| Cow position: | chr27:1208727-1209230 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 242-739 |
| Cow position: | chr27:13897573-13898064 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 242-740 |
| Cow position: | chr27:26556602-26556112 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 246-749 |
| Cow position: | chr27:892598-893088 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 246-749 |
| Cow position: | chr27:25805494-25805003 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 246-749 |
| Cow position: | chr27:26324199-26324693 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 251-525 |
| Cow position: | chr27:15639117-15638858 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-534 |
| Cow position: | chr27:5985708-5985433 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 251-614 |
| Cow position: | chr27:11471999-11471652 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 187, 14 |
| Conread position: | 251-723 |
| Cow position: | chr27:21288829-21288368 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 251-747 |
| Cow position: | chr27:23334557-23335040 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 14 |
| Conread position: | 251-749 |
| Cow position: | chr27:9993798-9993327 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr27:14461064-14460578 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 256-753 |
| Cow position: | chr27:25116645-25117126 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 261-452 |
| Cow position: | chr27:16438749-16438935 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 265-449 |
| Cow position: | chr27:15279221-15279037 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-749 |
| Cow position: | chr27:27662302-27662780 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 102 |
| Conread position: | 286-735 |
| Cow position: | chr27:25999629-25999194 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 102 |
| Conread position: | 356-753 |
| Cow position: | chr27:2364227-2364635 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 356-753 |
| Cow position: | chr27:15540815-15541212 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 71 |
| Conread position: | 356-753 |
| Cow position: | chr27:16034905-16034509 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 39 |
| Conread position: | 398-645 |
| Cow position: | chr27:16431994-16432244 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 404-753 |
| Cow position: | chr27:25003004-25002648 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 410-754 |
| Cow position: | chr27:5906573-5906908 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 433-596 |
| Cow position: | chr27:23930583-23930420 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 35 |
| Conread position: | 435-732 |
| Cow position: | chr27:28890295-28890589 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 176, 118 |
| Conread position: | 442-750 |
| Cow position: | chr27:5997176-5996851 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 463-754 |
| Cow position: | chr27:16438924-16439207 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 463-755 |
| Cow position: | chr27:27051254-27051549 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 471-754 |
| Cow position: | chr27:15278467-15278179 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 543-754 |
| Cow position: | chr27:26226975-26227178 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 5 |
Show alignments to all cow chromosomes.