Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 236-597
Cow position: chr28:15378592-15378246 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 242-754
Cow position: chr28:5812132-5812637 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 242-758
Cow position: chr28:10619680-10619178 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 33

Conread position: 244-557
Cow position: chr28:5936449-5936748 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 127

Conread position: 244-749
Cow position: chr28:10582554-10582063 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 102

Conread position: 244-749
Cow position: chr28:14706240-14705749 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 127

Conread position: 246-710
Cow position: chr28:34648378-34648816 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 310
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 72

Conread position: 251-560
Cow position: chr28:28973788-28973495 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 251-605
Cow position: chr28:1504078-1504417 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 251-606
Cow position: chr28:15035979-15035639 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-611
Cow position: chr28:5752723-5752378 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 251-614
Cow position: chr28:33251756-33252129 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 125, 14

Conread position: 251-743
Cow position: chr28:13459411-13459888 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr28:781834-782318 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 14

Conread position: 251-749
Cow position: chr28:1168727-1168242 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 251-749
Cow position: chr28:2083041-2083527 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr28:3193338-3192868 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr28:5565298-5565785 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr28:8378000-8378487 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 251-749
Cow position: chr28:17668075-17667591 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 14

Conread position: 251-749
Cow position: chr28:26426822-26426351 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 17

Conread position: 251-752
Cow position: chr28:32792936-32792453 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-759
Cow position: chr28:17387918-17388414 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 252-749
Cow position: chr28:7001441-7001911 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 13

Conread position: 255-759
Cow position: chr28:21325222-21325722 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 184

Conread position: 256-758
Cow position: chr28:8722020-8721517 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 9

Conread position: 261-611
Cow position: chr28:2990521-2990184 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 270, 164

Conread position: 261-740
Cow position: chr28:21358460-21358928 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 141

Conread position: 261-754
Cow position: chr28:7816688-7817151 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 57

Conread position: 263-700
Cow position: chr28:26007483-26007903 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 16

Conread position: 267-595
Cow position: chr28:24667061-24667380 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 268-676
Cow position: chr28:5115620-5115233 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 77, 0

Conread position: 268-739
Cow position: chr28:34593297-34593756 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 56

Conread position: 268-742
Cow position: chr28:12149781-12150231 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 268-749
Cow position: chr28:22261695-22261228 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 47

Conread position: 272-753
Cow position: chr28:22827512-22827979 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 274-756
Cow position: chr28:5796273-5796745 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 160

Conread position: 280-756
Cow position: chr28:29819038-29819500 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 54

Conread position: 289-632
Cow position: chr28:7790766-7790436 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 138

Conread position: 290-756
Cow position: chr28:1387918-1387465 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 297-753
Cow position: chr28:18520980-18520533 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 63

Conread position: 299-611
Cow position: chr28:7739737-7740037 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 271, 71

Conread position: 299-767
Cow position: chr28:13522216-13522668 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 71

Conread position: 356-624
Cow position: chr28:489018-489285 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 356-753
Cow position: chr28:1952671-1953058 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 104

Conread position: 356-753
Cow position: chr28:6780799-6780400 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr28:14750075-14750476 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 115

Conread position: 356-753
Cow position: chr28:15950509-15950909 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-770
Cow position: chr28:13441349-13440930 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 91

Conread position: 372-753
Cow position: chr28:15920915-15920538 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 15

Conread position: 374-755
Cow position: chr28:15681439-15681818 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 384-754
Cow position: chr28:9155726-9155357 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 394-675
Cow position: chr28:29437573-29437293 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 79

Conread position: 397-754
Cow position: chr28:9953701-9954064 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 408-731
Cow position: chr28:15584977-15585295 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 167, 62

Conread position: 410-754
Cow position: chr28:2591505-2591844 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 450-719
Cow position: chr28:22092815-22092544 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 21

Conread position: 459-611
Cow position: chr28:9137398-9137246 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 461-753
Cow position: chr28:32331766-32331480 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 473-754
Cow position: chr28:7901003-7901279 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 475-749
Cow position: chr28:1815221-1814945 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 170

Conread position: 479-753
Cow position: chr28:7821915-7822185 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 185, 74

Conread position: 491-753
Cow position: chr28:24587098-24587361 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 66

Conread position: 504-732
Cow position: chr28:14491140-14491364 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 530-759
Cow position: chr28:4381108-4380887 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 57

Conread position: 585-754
Cow position: chr28:2846738-2846571 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 77

Conread position: 600-754
Cow position: chr28:24652062-24652219 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 146

Conread position: 601-739
Cow position: chr28:1504627-1504768 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 602-755
Cow position: chr28:2989909-2989760 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 104

Show alignments to all cow chromosomes.