Cow genome map
Conread name: | Lng1-LNG010103A02 |
Conread position: | 236-597 |
Cow position: | chr28:15378592-15378246 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 245 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 242-754 |
Cow position: | chr28:5812132-5812637 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 16 |
Conread position: | 242-758 |
Cow position: | chr28:10619680-10619178 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 465, 33 |
Conread position: | 244-557 |
Cow position: | chr28:5936449-5936748 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 9, 127 |
Conread position: | 244-749 |
Cow position: | chr28:10582554-10582063 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 102 |
Conread position: | 244-749 |
Cow position: | chr28:14706240-14705749 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 127 |
Conread position: | 246-710 |
Cow position: | chr28:34648378-34648816 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 310 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 15, 72 |
Conread position: | 251-560 |
Cow position: | chr28:28973788-28973495 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 204 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-605 |
Cow position: | chr28:1504078-1504417 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 242 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-606 |
Cow position: | chr28:15035979-15035639 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-611 |
Cow position: | chr28:5752723-5752378 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 249 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-614 |
Cow position: | chr28:33251756-33252129 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 258 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 125, 14 |
Conread position: | 251-743 |
Cow position: | chr28:13459411-13459888 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr28:781834-782318 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 14 |
Conread position: | 251-749 |
Cow position: | chr28:1168727-1168242 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 14 |
Conread position: | 251-749 |
Cow position: | chr28:2083041-2083527 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr28:3193338-3192868 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr28:5565298-5565785 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr28:8378000-8378487 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 251-749 |
Cow position: | chr28:17668075-17667591 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 14 |
Conread position: | 251-749 |
Cow position: | chr28:26426822-26426351 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 17 |
Conread position: | 251-752 |
Cow position: | chr28:32792936-32792453 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-759 |
Cow position: | chr28:17387918-17388414 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 252-749 |
Cow position: | chr28:7001441-7001911 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 13 |
Conread position: | 255-759 |
Cow position: | chr28:21325222-21325722 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 184 |
Conread position: | 256-758 |
Cow position: | chr28:8722020-8721517 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 9 |
Conread position: | 261-611 |
Cow position: | chr28:2990521-2990184 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 243 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 270, 164 |
Conread position: | 261-740 |
Cow position: | chr28:21358460-21358928 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 141 |
Conread position: | 261-754 |
Cow position: | chr28:7816688-7817151 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 467, 57 |
Conread position: | 263-700 |
Cow position: | chr28:26007483-26007903 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 16 |
Conread position: | 267-595 |
Cow position: | chr28:24667061-24667380 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 268-676 |
Cow position: | chr28:5115620-5115233 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 272 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 268-739 |
Cow position: | chr28:34593297-34593756 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 395, 56 |
Conread position: | 268-742 |
Cow position: | chr28:12149781-12150231 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 268-749 |
Cow position: | chr28:22261695-22261228 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 395, 47 |
Conread position: | 272-753 |
Cow position: | chr28:22827512-22827979 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 17 |
Conread position: | 274-756 |
Cow position: | chr28:5796273-5796745 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 160 |
Conread position: | 280-756 |
Cow position: | chr28:29819038-29819500 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 384, 54 |
Conread position: | 289-632 |
Cow position: | chr28:7790766-7790436 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 243 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 74, 138 |
Conread position: | 290-756 |
Cow position: | chr28:1387918-1387465 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 297-753 |
Cow position: | chr28:18520980-18520533 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 63 |
Conread position: | 299-611 |
Cow position: | chr28:7739737-7740037 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 223 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 271, 71 |
Conread position: | 299-767 |
Cow position: | chr28:13522216-13522668 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 71 |
Conread position: | 356-624 |
Cow position: | chr28:489018-489285 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 186 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 356-753 |
Cow position: | chr28:1952671-1953058 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 104 |
Conread position: | 356-753 |
Cow position: | chr28:6780799-6780400 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 356-753 |
Cow position: | chr28:14750075-14750476 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 115 |
Conread position: | 356-753 |
Cow position: | chr28:15950509-15950909 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 114 |
Conread position: | 356-770 |
Cow position: | chr28:13441349-13440930 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 91 |
Conread position: | 372-753 |
Cow position: | chr28:15920915-15920538 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 15 |
Conread position: | 374-755 |
Cow position: | chr28:15681439-15681818 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 7 |
Conread position: | 384-754 |
Cow position: | chr28:9155726-9155357 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 7 |
Conread position: | 394-675 |
Cow position: | chr28:29437573-29437293 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 189 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 17, 79 |
Conread position: | 397-754 |
Cow position: | chr28:9953701-9954064 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 408-731 |
Cow position: | chr28:15584977-15585295 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 211 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 167, 62 |
Conread position: | 410-754 |
Cow position: | chr28:2591505-2591844 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 450-719 |
Cow position: | chr28:22092815-22092544 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 178 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 103, 21 |
Conread position: | 459-611 |
Cow position: | chr28:9137398-9137246 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 110 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 461-753 |
Cow position: | chr28:32331766-32331480 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 190 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 473-754 |
Cow position: | chr28:7901003-7901279 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 475-749 |
Cow position: | chr28:1815221-1814945 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 170 |
Conread position: | 479-753 |
Cow position: | chr28:7821915-7822185 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 209 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 185, 74 |
Conread position: | 491-753 |
Cow position: | chr28:24587098-24587361 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 23, 66 |
Conread position: | 504-732 |
Cow position: | chr28:14491140-14491364 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 530-759 |
Cow position: | chr28:4381108-4380887 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 175 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 134, 57 |
Conread position: | 585-754 |
Cow position: | chr28:2846738-2846571 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 128 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 11, 77 |
Conread position: | 600-754 |
Cow position: | chr28:24652062-24652219 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 128 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 60, 146 |
Conread position: | 601-739 |
Cow position: | chr28:1504627-1504768 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 602-755 |
Cow position: | chr28:2989909-2989760 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 57, 104 |
Show alignments to all cow chromosomes.