Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 236-686
Cow position: chr29:45587910-45587472 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 29

Conread position: 236-749
Cow position: chr29:43321939-43322448 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 29

Conread position: 236-753
Cow position: chr29:35296256-35296768 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 22

Conread position: 246-735
Cow position: chr29:15950779-15950309 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 32

Conread position: 246-749
Cow position: chr29:45459122-45459604 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 246-756
Cow position: chr29:103977-104469 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 121

Conread position: 251-587
Cow position: chr29:21431950-21431617 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 14

Conread position: 251-739
Cow position: chr29:10648842-10648369 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 251-747
Cow position: chr29:2099249-2099731 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 14

Conread position: 251-749
Cow position: chr29:6267090-6266605 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr29:7431813-7431327 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr29:16021936-16022418 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 14

Conread position: 251-749
Cow position: chr29:19623841-19623358 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-749
Cow position: chr29:19652511-19652997 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 14

Conread position: 251-749
Cow position: chr29:20250562-20251048 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 14

Conread position: 251-749
Cow position: chr29:23975236-23975725 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr29:32539214-32539699 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position: chr29:39080303-39079817 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-751
Cow position: chr29:25933141-25932653 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 14

Conread position: 251-754
Cow position: chr29:10824553-10824062 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-759
Cow position: chr29:21245976-21246468 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 14

Conread position: 251-759
Cow position: chr29:26165415-26164924 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-759
Cow position: chr29:34800386-34799911 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-759
Cow position: chr29:38226397-38226900 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 251-759
Cow position: chr29:40503576-40503080 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 14

Conread position: 251-770
Cow position: chr29:2689324-2689814 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 14

Conread position: 255-754
Cow position: chr29:10848690-10848215 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 87

Conread position: 261-588
Cow position: chr29:8663685-8664001 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 261-750
Cow position: chr29:11048702-11049172 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 218

Conread position: 261-754
Cow position: chr29:30810968-30811425 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 92

Conread position: 261-762
Cow position: chr29:2750972-2750492 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 268-755
Cow position: chr29:5957007-5957497 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 170

Conread position: 280-749
Cow position: chr29:49046-48587 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 90

Conread position: 290-557
Cow position: chr29:42649798-42650057 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 290-557
Cow position: chr29:42801658-42801917 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 302-753
Cow position: chr29:13577846-13578312 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 112

Conread position: 308-749
Cow position: chr29:2841919-2841480 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 356-551
Cow position: chr29:18857292-18857098 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 356-753
Cow position: chr29:611119-610718 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 116

Conread position: 356-753
Cow position: chr29:15895352-15894957 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 76

Conread position: 356-753
Cow position: chr29:15969646-15969257 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 356-753
Cow position: chr29:16109222-16109622 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 114

Conread position: 356-753
Cow position: chr29:27250838-27250441 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 18

Conread position: 356-753
Cow position: chr29:32315536-32315934 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 114

Conread position: 357-753
Cow position: chr29:28061171-28060772 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 113

Conread position: 376-672
Cow position: chr29:14368460-14368757 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 176, 189

Conread position: 391-754
Cow position: chr29:21543838-21543471 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 391-754
Cow position: chr29:27041226-27040870 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 391-754
Cow position: chr29:35196216-35196566 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 402-756
Cow position: chr29:4635420-4635071 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 34

Conread position: 413-753
Cow position: chr29:31121359-31121699 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 418-745
Cow position: chr29:9644165-9643840 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 443-731
Cow position: chr29:32220306-32220593 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 230, 25

Conread position: 444-667
Cow position: chr29:34752104-34751890 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 449-754
Cow position: chr29:14013059-14013366 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 129, 11

Conread position: 449-754
Cow position: chr29:14073354-14073045 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 87, 11

Conread position: 452-732
Cow position: chr29:2468350-2468058 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 204, 9

Conread position: 452-753
Cow position: chr29:43366401-43366104 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 19

Conread position: 461-749
Cow position: chr29:7840396-7840685 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 99

Conread position: 463-732
Cow position: chr29:16769736-16770004 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 103

Conread position: 463-748
Cow position: chr29:12796863-12796578 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 34

Conread position: 463-767
Cow position: chr29:1714860-1715155 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 297, 90

Conread position: 547-732
Cow position: chr29:42801870-42802055 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 30

Conread position: 547-745
Cow position: chr29:42650010-42650209 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 30

Conread position: 559-753
Cow position: chr29:31180821-31181017 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 105, 17

Conread position: 564-770
Cow position: chr29:13853319-13853111 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 59

Conread position: 570-756
Cow position: chr29:21427348-21427159 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 581-753
Cow position: chr29:34609227-34609059 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 55

Conread position: 603-754
Cow position: chr29:17662661-17662817 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.