Cow genome map
Conread name: | Lng1-LNG010103A02 |
Conread position: | 236-686 |
Cow position: | chr29:45587910-45587472 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 29 |
Conread position: | 236-749 |
Cow position: | chr29:43321939-43322448 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 29 |
Conread position: | 236-753 |
Cow position: | chr29:35296256-35296768 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 22 |
Conread position: | 246-735 |
Cow position: | chr29:15950779-15950309 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 32 |
Conread position: | 246-749 |
Cow position: | chr29:45459122-45459604 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 246-756 |
Cow position: | chr29:103977-104469 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 121 |
Conread position: | 251-587 |
Cow position: | chr29:21431950-21431617 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 14 |
Conread position: | 251-739 |
Cow position: | chr29:10648842-10648369 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 251-747 |
Cow position: | chr29:2099249-2099731 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 14 |
Conread position: | 251-749 |
Cow position: | chr29:6267090-6266605 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr29:7431813-7431327 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr29:16021936-16022418 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 14 |
Conread position: | 251-749 |
Cow position: | chr29:19623841-19623358 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-749 |
Cow position: | chr29:19652511-19652997 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 14 |
Conread position: | 251-749 |
Cow position: | chr29:20250562-20251048 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 14 |
Conread position: | 251-749 |
Cow position: | chr29:23975236-23975725 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr29:32539214-32539699 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-749 |
Cow position: | chr29:39080303-39079817 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-751 |
Cow position: | chr29:25933141-25932653 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 14 |
Conread position: | 251-754 |
Cow position: | chr29:10824553-10824062 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-759 |
Cow position: | chr29:21245976-21246468 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 407, 14 |
Conread position: | 251-759 |
Cow position: | chr29:26165415-26164924 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 14 |
Conread position: | 251-759 |
Cow position: | chr29:34800386-34799911 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 251-759 |
Cow position: | chr29:38226397-38226900 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 14 |
Conread position: | 251-759 |
Cow position: | chr29:40503576-40503080 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 14 |
Conread position: | 251-770 |
Cow position: | chr29:2689324-2689814 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 475, 14 |
Conread position: | 255-754 |
Cow position: | chr29:10848690-10848215 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 87 |
Conread position: | 261-588 |
Cow position: | chr29:8663685-8664001 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 261-750 |
Cow position: | chr29:11048702-11049172 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 218 |
Conread position: | 261-754 |
Cow position: | chr29:30810968-30811425 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 92 |
Conread position: | 261-762 |
Cow position: | chr29:2750972-2750492 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 268-755 |
Cow position: | chr29:5957007-5957497 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 170 |
Conread position: | 280-749 |
Cow position: | chr29:49046-48587 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 383, 90 |
Conread position: | 290-557 |
Cow position: | chr29:42649798-42650057 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 179 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 290-557 |
Cow position: | chr29:42801658-42801917 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 181 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 302-753 |
Cow position: | chr29:13577846-13578312 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 112 |
Conread position: | 308-749 |
Cow position: | chr29:2841919-2841480 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 41 |
Conread position: | 356-551 |
Cow position: | chr29:18857292-18857098 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 131 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 356-753 |
Cow position: | chr29:611119-610718 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 116 |
Conread position: | 356-753 |
Cow position: | chr29:15895352-15894957 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 76 |
Conread position: | 356-753 |
Cow position: | chr29:15969646-15969257 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 18 |
Conread position: | 356-753 |
Cow position: | chr29:16109222-16109622 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 114 |
Conread position: | 356-753 |
Cow position: | chr29:27250838-27250441 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 18 |
Conread position: | 356-753 |
Cow position: | chr29:32315536-32315934 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 114 |
Conread position: | 357-753 |
Cow position: | chr29:28061171-28060772 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 306, 113 |
Conread position: | 376-672 |
Cow position: | chr29:14368460-14368757 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 204 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 176, 189 |
Conread position: | 391-754 |
Cow position: | chr29:21543838-21543471 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 22 |
Conread position: | 391-754 |
Cow position: | chr29:27041226-27040870 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 22 |
Conread position: | 391-754 |
Cow position: | chr29:35196216-35196566 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 23 |
Conread position: | 402-756 |
Cow position: | chr29:4635420-4635071 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 228 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 170, 34 |
Conread position: | 413-753 |
Cow position: | chr29:31121359-31121699 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 57 |
Conread position: | 418-745 |
Cow position: | chr29:9644165-9643840 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 443-731 |
Cow position: | chr29:32220306-32220593 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 185 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 230, 25 |
Conread position: | 444-667 |
Cow position: | chr29:34752104-34751890 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 157 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 449-754 |
Cow position: | chr29:14013059-14013366 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 212 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 129, 11 |
Conread position: | 449-754 |
Cow position: | chr29:14073354-14073045 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 214 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 87, 11 |
Conread position: | 452-732 |
Cow position: | chr29:2468350-2468058 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 209 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 204, 9 |
Conread position: | 452-753 |
Cow position: | chr29:43366401-43366104 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 198, 19 |
Conread position: | 461-749 |
Cow position: | chr29:7840396-7840685 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 99 |
Conread position: | 463-732 |
Cow position: | chr29:16769736-16770004 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 103 |
Conread position: | 463-748 |
Cow position: | chr29:12796863-12796578 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 34 |
Conread position: | 463-767 |
Cow position: | chr29:1714860-1715155 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 198 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 297, 90 |
Conread position: | 547-732 |
Cow position: | chr29:42801870-42802055 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 141 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 49, 30 |
Conread position: | 547-745 |
Cow position: | chr29:42650010-42650209 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 150 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 49, 30 |
Conread position: | 559-753 |
Cow position: | chr29:31180821-31181017 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 154 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 105, 17 |
Conread position: | 564-770 |
Cow position: | chr29:13853319-13853111 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 99, 59 |
Conread position: | 570-756 |
Cow position: | chr29:21427348-21427159 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 581-753 |
Cow position: | chr29:34609227-34609059 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 78, 55 |
Conread position: | 603-754 |
Cow position: | chr29:17662661-17662817 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.