Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 227-716 |
| Cow position: | chr3:16867499-16867006 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 236-749 |
| Cow position: | chr3:593905-594385 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 246-572 |
| Cow position: | chr3:17950977-17951295 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 246-589 |
| Cow position: | chr3:14755184-14754845 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 246-735 |
| Cow position: | chr3:19692771-19692299 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 246-745 |
| Cow position: | chr3:36882597-36882111 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 246-749 |
| Cow position: | chr3:43040370-43039886 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 19 |
| Conread position: | 246-749 |
| Cow position: | chr3:59860676-59861172 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 246-754 |
| Cow position: | chr3:15177629-15178122 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 152 |
| Conread position: | 247-754 |
| Cow position: | chr3:54865394-54864886 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 345 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 146, 18 |
| Conread position: | 248-754 |
| Cow position: | chr3:64358857-64358354 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 250-754 |
| Cow position: | chr3:58208765-58208275 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 251-506 |
| Cow position: | chr3:43193383-43193143 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-585 |
| Cow position: | chr3:53515055-53515373 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 251-686 |
| Cow position: | chr3:47273643-47273225 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-732 |
| Cow position: | chr3:69932722-69933187 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-733 |
| Cow position: | chr3:23292083-23291614 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 13 |
| Conread position: | 251-739 |
| Cow position: | chr3:57485401-57484927 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-744 |
| Cow position: | chr3:5954847-5954385 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 14 |
| Conread position: | 251-749 |
| Cow position: | chr3:10238974-10239455 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 251-749 |
| Cow position: | chr3:18810825-18811309 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 17 |
| Conread position: | 251-749 |
| Cow position: | chr3:40822693-40823195 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 251-749 |
| Cow position: | chr3:48061501-48061024 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr3:64018041-64017557 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr3:75041825-75041360 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr3:78028090-78027604 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 14 |
| Conread position: | 251-759 |
| Cow position: | chr3:5882861-5883357 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-759 |
| Cow position: | chr3:18543111-18542591 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 252-749 |
| Cow position: | chr3:34031574-34031092 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 13 |
| Conread position: | 254-749 |
| Cow position: | chr3:49545845-49545369 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 255-753 |
| Cow position: | chr3:14634762-14634301 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 255-754 |
| Cow position: | chr3:18357548-18357074 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 326 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 308, 132 |
| Conread position: | 255-755 |
| Cow position: | chr3:2909759-2909281 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 144 |
| Conread position: | 258-596 |
| Cow position: | chr3:18464432-18464099 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 258-610 |
| Cow position: | chr3:66637385-66637711 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 258-754 |
| Cow position: | chr3:5830281-5829817 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 51 |
| Conread position: | 260-747 |
| Cow position: | chr3:49677078-49677563 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 202 |
| Conread position: | 260-753 |
| Cow position: | chr3:47082347-47081846 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 261-452 |
| Cow position: | chr3:44255631-44255445 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 261-693 |
| Cow position: | chr3:24592279-24591861 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 47 |
| Conread position: | 261-702 |
| Cow position: | chr3:32623707-32623252 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 153 |
| Conread position: | 261-749 |
| Cow position: | chr3:19801748-19802230 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 166 |
| Conread position: | 261-749 |
| Cow position: | chr3:21946075-21945598 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 98 |
| Conread position: | 261-750 |
| Cow position: | chr3:36099384-36098897 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 323 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 302, 133 |
| Conread position: | 261-753 |
| Cow position: | chr3:2633269-2633739 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 164 |
| Conread position: | 261-753 |
| Cow position: | chr3:22335196-22335703 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 305 |
| Conread position: | 261-753 |
| Cow position: | chr3:37968386-37968892 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 93 |
| Conread position: | 261-753 |
| Cow position: | chr3:40340665-40340152 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 152 |
| Conread position: | 261-754 |
| Cow position: | chr3:9716154-9716625 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 36 |
| Conread position: | 261-754 |
| Cow position: | chr3:39326028-39326499 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 47 |
| Conread position: | 261-755 |
| Cow position: | chr3:6684787-6685273 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 134 |
| Conread position: | 261-755 |
| Cow position: | chr3:52865428-52864937 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 201 |
| Conread position: | 268-615 |
| Cow position: | chr3:46502360-46502704 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 119, 200 |
| Conread position: | 268-672 |
| Cow position: | chr3:5996534-5996142 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 129 |
| Conread position: | 268-729 |
| Cow position: | chr3:3053952-3054396 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 11 |
| Conread position: | 271-754 |
| Cow position: | chr3:56341099-56340612 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 203 |
| Conread position: | 272-753 |
| Cow position: | chr3:50128532-50128069 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 280-749 |
| Cow position: | chr3:2711608-2711154 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 62 |
| Conread position: | 280-749 |
| Cow position: | chr3:38865755-38866208 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 290-731 |
| Cow position: | chr3:42431581-42432024 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 300-749 |
| Cow position: | chr3:21183310-21182878 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 70 |
| Conread position: | 300-757 |
| Cow position: | chr3:3979752-3980200 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 150 |
| Conread position: | 308-749 |
| Cow position: | chr3:72629448-72629875 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 311-754 |
| Cow position: | chr3:63005773-63005337 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 325-724 |
| Cow position: | chr3:30313953-30314338 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 333-753 |
| Cow position: | chr3:49614583-49614165 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 107 |
| Conread position: | 351-732 |
| Cow position: | chr3:83295835-83295460 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 250, 36 |
| Conread position: | 355-753 |
| Cow position: | chr3:45032155-45032553 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 356-587 |
| Cow position: | chr3:7159369-7159144 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 356-635 |
| Cow position: | chr3:24359673-24359951 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 356-728 |
| Cow position: | chr3:14440315-14439943 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:3522426-3522826 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:4285300-4285697 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:15989616-15989224 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 193 |
| Conread position: | 356-753 |
| Cow position: | chr3:17829235-17828838 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:19878076-19878474 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 69 |
| Conread position: | 356-753 |
| Cow position: | chr3:24313890-24314290 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:32146671-32146279 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 67 |
| Conread position: | 356-753 |
| Cow position: | chr3:36117078-36117487 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:46678501-46678101 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:64028671-64028274 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:64650036-64650443 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 122 |
| Conread position: | 356-753 |
| Cow position: | chr3:66891542-66891150 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 114 |
| Conread position: | 356-753 |
| Cow position: | chr3:72704609-72705009 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-754 |
| Cow position: | chr3:79433793-79433406 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 356-755 |
| Cow position: | chr3:46861887-46861482 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 116 |
| Conread position: | 356-770 |
| Cow position: | chr3:2916881-2917291 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 114 |
| Conread position: | 360-646 |
| Cow position: | chr3:83700714-83700445 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 362-753 |
| Cow position: | chr3:19938331-19938725 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 108 |
| Conread position: | 370-753 |
| Cow position: | chr3:57856162-57856548 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 100 |
| Conread position: | 371-759 |
| Cow position: | chr3:56650838-56650452 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 97 |
| Conread position: | 372-753 |
| Cow position: | chr3:41212309-41211926 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 15 |
| Conread position: | 378-732 |
| Cow position: | chr3:3805807-3806145 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 381-754 |
| Cow position: | chr3:36126841-36127202 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 14 |
| Conread position: | 391-749 |
| Cow position: | chr3:31354805-31354450 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 394-720 |
| Cow position: | chr3:60387825-60388158 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 155, 163 |
| Conread position: | 397-743 |
| Cow position: | chr3:56320762-56321118 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 398-697 |
| Cow position: | chr3:13513750-13513450 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 398-754 |
| Cow position: | chr3:45775613-45775263 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 399-754 |
| Cow position: | chr3:66119106-66119468 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 402-673 |
| Cow position: | chr3:30929137-30929411 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 189, 66 |
| Conread position: | 402-720 |
| Cow position: | chr3:16072628-16072940 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 402-753 |
| Cow position: | chr3:50208821-50209172 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 7, 73 |
| Conread position: | 402-758 |
| Cow position: | chr3:48231510-48231179 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 403-719 |
| Cow position: | chr3:77564221-77564538 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 403-728 |
| Cow position: | chr3:4739434-4739141 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 404-749 |
| Cow position: | chr3:6781850-6782194 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 434-698 |
| Cow position: | chr3:66618676-66618939 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 434-754 |
| Cow position: | chr3:2653611-2653919 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 439-693 |
| Cow position: | chr3:77882956-77882698 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 190, 28 |
| Conread position: | 442-732 |
| Cow position: | chr3:19943576-19943854 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 442-755 |
| Cow position: | chr3:34396551-34396240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 215, 142 |
| Conread position: | 442-759 |
| Cow position: | chr3:78018993-78019312 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 444-749 |
| Cow position: | chr3:36691690-36691386 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 457-732 |
| Cow position: | chr3:49309161-49308894 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 463-749 |
| Cow position: | chr3:19757442-19757153 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 278 |
| Conread position: | 463-753 |
| Cow position: | chr3:207642-207350 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 281 |
| Conread position: | 463-753 |
| Cow position: | chr3:472071-472344 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 88 |
| Conread position: | 463-754 |
| Cow position: | chr3:5047666-5047373 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 123 |
| Conread position: | 463-754 |
| Cow position: | chr3:42580447-42580154 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 244 |
| Conread position: | 463-754 |
| Cow position: | chr3:70084118-70083834 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 34 |
| Conread position: | 463-754 |
| Cow position: | chr3:77474282-77474571 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 45 |
| Conread position: | 466-757 |
| Cow position: | chr3:31898448-31898157 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 43 |
| Conread position: | 467-770 |
| Cow position: | chr3:47179682-47179373 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 470-732 |
| Cow position: | chr3:14588213-14588471 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 190, 81 |
| Conread position: | 476-753 |
| Cow position: | chr3:45869661-45869399 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 251, 60 |
| Conread position: | 495-755 |
| Cow position: | chr3:26949066-26949327 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 505-767 |
| Cow position: | chr3:7168164-7168428 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 514-754 |
| Cow position: | chr3:50914879-50915117 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 137, 53 |
| Conread position: | 534-750 |
| Cow position: | chr3:66990391-66990608 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 539-754 |
| Cow position: | chr3:58947051-58947268 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 568-755 |
| Cow position: | chr3:17951983-17952174 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 569-735 |
| Cow position: | chr3:80871531-80871696 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 580-755 |
| Cow position: | chr3:4026910-4027086 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 95 |
| Conread position: | 581-771 |
| Cow position: | chr3:18463940-18463756 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 183, 64 |
| Conread position: | 602-754 |
| Cow position: | chr3:66638396-66638551 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.