Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 227-716
Cow position:
Alignm length: 509
Alignm identity: 336
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 27

Conread position: 236-749
Cow position:
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 246-572
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 74

Conread position: 246-589
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 32

Conread position: 246-735
Cow position:
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 246-745
Cow position:
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 246-749
Cow position:
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 19

Conread position: 246-749
Cow position:
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 127

Conread position: 246-754
Cow position:
Alignm length: 513
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 247-754
Cow position:
Alignm length: 532
Alignm identity: 345
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 146, 18

Conread position: 248-754
Cow position:
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 124

Conread position: 250-754
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 16

Conread position: 251-506
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 251-585
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 251-686
Cow position:
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-732
Cow position:
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-733
Cow position:
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 13

Conread position: 251-739
Cow position:
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-744
Cow position:
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 14

Conread position: 251-749
Cow position:
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 251-749
Cow position:
Alignm length: 502
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 17

Conread position: 251-749
Cow position:
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 14

Conread position: 251-749
Cow position:
Alignm length: 501
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position:
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-749
Cow position:
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-749
Cow position:
Alignm length: 502
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 14

Conread position: 251-759
Cow position:
Alignm length: 512
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 14

Conread position: 251-759
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 17

Conread position: 252-749
Cow position:
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 13

Conread position: 254-749
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 255-753
Cow position:
Alignm length: 499
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 255-754
Cow position:
Alignm length: 501
Alignm identity: 326
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 308, 132

Conread position: 255-755
Cow position:
Alignm length: 505
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 144

Conread position: 258-596
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 258-610
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 258-754
Cow position:
Alignm length: 500
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 51

Conread position: 260-747
Cow position:
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 202

Conread position: 260-753
Cow position:
Alignm length: 517
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 25

Conread position: 261-452
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 261-693
Cow position:
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 47

Conread position: 261-702
Cow position:
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 153

Conread position: 261-749
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 166

Conread position: 261-749
Cow position:
Alignm length: 496
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 98

Conread position: 261-750
Cow position:
Alignm length: 501
Alignm identity: 323
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 302, 133

Conread position: 261-753
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 164

Conread position: 261-753
Cow position:
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 305

Conread position: 261-753
Cow position:
Alignm length: 511
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 93

Conread position: 261-753
Cow position:
Alignm length: 516
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 152

Conread position: 261-754
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 36

Conread position: 261-754
Cow position:
Alignm length: 495
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 47

Conread position: 261-755
Cow position:
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 134

Conread position: 261-755
Cow position:
Alignm length: 498
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 201

Conread position: 268-615
Cow position:
Alignm length: 354
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 200

Conread position: 268-672
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 129

Conread position: 268-729
Cow position:
Alignm length: 463
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 11

Conread position: 271-754
Cow position:
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 203

Conread position: 272-753
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 280-749
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 62

Conread position: 280-749
Cow position:
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 290-731
Cow position:
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 300-749
Cow position:
Alignm length: 451
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 70

Conread position: 300-757
Cow position:
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 150

Conread position: 308-749
Cow position:
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 311-754
Cow position:
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 325-724
Cow position:
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 333-753
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 107

Conread position: 351-732
Cow position:
Alignm length: 383
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 250, 36

Conread position: 355-753
Cow position:
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 356-587
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 356-635
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 356-728
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 114

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 114

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 193

Conread position: 356-753
Cow position:
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 114

Conread position: 356-753
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 69

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 67

Conread position: 356-753
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position:
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 114

Conread position: 356-753
Cow position:
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 114

Conread position: 356-753
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-754
Cow position:
Alignm length: 407
Alignm identity: 262
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 11

Conread position: 356-755
Cow position:
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 116

Conread position: 356-770
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 114

Conread position: 360-646
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 362-753
Cow position:
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 108

Conread position: 370-753
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 100

Conread position: 371-759
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 97

Conread position: 372-753
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 15

Conread position: 378-732
Cow position:
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 116

Conread position: 381-754
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 14

Conread position: 391-749
Cow position:
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 394-720
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 155, 163

Conread position: 397-743
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 41

Conread position: 398-697
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 73

Conread position: 398-754
Cow position:
Alignm length: 357
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 399-754
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 402-673
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 189, 66

Conread position: 402-720
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 47

Conread position: 402-753
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 7, 73

Conread position: 402-758
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 403-719
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 100

Conread position: 403-728
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 404-749
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 434-698
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 53

Conread position: 434-754
Cow position:
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 439-693
Cow position:
Alignm length: 262
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 190, 28

Conread position: 442-732
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 27

Conread position: 442-755
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 215, 142

Conread position: 442-759
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 19

Conread position: 444-749
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 24

Conread position: 457-732
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 13

Conread position: 463-749
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 278

Conread position: 463-753
Cow position:
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 281

Conread position: 463-753
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 88

Conread position: 463-754
Cow position:
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 463-754
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 244

Conread position: 463-754
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 34

Conread position: 463-754
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 45

Conread position: 466-757
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 43

Conread position: 467-770
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 470-732
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 190, 81

Conread position: 476-753
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 251, 60

Conread position: 495-755
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 42

Conread position: 505-767
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 0

Conread position: 514-754
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 137, 53

Conread position: 534-750
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 36

Conread position: 539-754
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 120, 106

Conread position: 568-755
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 569-735
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 580-755
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 95

Conread position: 581-771
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 183, 64

Conread position: 602-754
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.