Cow genome map
| Conread name: | Lng1-LNG010103A02 |
| Conread position: | 239-753 |
| Cow position: | chr4:23115075-23114560 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 246-662 |
| Cow position: | chr4:41118247-41118650 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 19 |
| Conread position: | 246-739 |
| Cow position: | chr4:21338867-21338387 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 12 |
| Conread position: | 246-749 |
| Cow position: | chr4:6491225-6490735 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 19 |
| Conread position: | 246-749 |
| Cow position: | chr4:36895494-36895985 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 19 |
| Conread position: | 247-755 |
| Cow position: | chr4:34185734-34185250 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 250-754 |
| Cow position: | chr4:1371864-1371398 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 251-655 |
| Cow position: | chr4:3357854-3358239 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-655 |
| Cow position: | chr4:57978548-57978931 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 251-671 |
| Cow position: | chr4:33074255-33073854 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-703 |
| Cow position: | chr4:46713207-46712776 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-739 |
| Cow position: | chr4:25600475-25600011 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 14 |
| Conread position: | 251-744 |
| Cow position: | chr4:29532589-29532108 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:3960721-3961203 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-749 |
| Cow position: | chr4:13491698-13492187 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:18516014-18516507 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:24446071-24445588 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:33492936-33493423 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:41330565-41331052 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:43320511-43320025 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:43880236-43880720 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 17 |
| Conread position: | 251-749 |
| Cow position: | chr4:45050170-45049687 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 464, 14 |
| Conread position: | 251-749 |
| Cow position: | chr4:48025531-48026009 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 14 |
| Conread position: | 251-751 |
| Cow position: | chr4:355041-355524 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 251-755 |
| Cow position: | chr4:4905280-4905770 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 14 |
| Conread position: | 251-759 |
| Cow position: | chr4:1050498-1049999 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 255-755 |
| Cow position: | chr4:46663324-46663814 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 115 |
| Conread position: | 260-724 |
| Cow position: | chr4:21358802-21359231 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 261-732 |
| Cow position: | chr4:8598988-8598544 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 261-750 |
| Cow position: | chr4:66925149-66925617 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 111 |
| Conread position: | 261-753 |
| Cow position: | chr4:528095-528609 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 220 |
| Conread position: | 261-753 |
| Cow position: | chr4:47765070-47764554 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 268-739 |
| Cow position: | chr4:16359046-16359488 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 268-749 |
| Cow position: | chr4:31668471-31668925 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 88 |
| Conread position: | 279-600 |
| Cow position: | chr4:54955102-54955432 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 202 |
| Conread position: | 279-754 |
| Cow position: | chr4:58883522-58883066 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 306 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 290-753 |
| Cow position: | chr4:30308304-30307836 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 124 |
| Conread position: | 291-753 |
| Cow position: | chr4:9311367-9311853 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 299-749 |
| Cow position: | chr4:44724257-44724694 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 82 |
| Conread position: | 299-754 |
| Cow position: | chr4:10407932-10408397 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 300-753 |
| Cow position: | chr4:39272756-39272324 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 108, 87 |
| Conread position: | 334-752 |
| Cow position: | chr4:28830239-28830654 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 91 |
| Conread position: | 356-662 |
| Cow position: | chr4:41954011-41954315 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 356-753 |
| Cow position: | chr4:101712-101313 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:157745-158131 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 45 |
| Conread position: | 356-753 |
| Cow position: | chr4:602213-602610 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:1931404-1931007 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:3124997-3125397 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:5879402-5879787 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:6269405-6269012 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 114 |
| Conread position: | 356-753 |
| Cow position: | chr4:13547240-13547643 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 356-753 |
| Cow position: | chr4:65224318-65223918 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 114 |
| Conread position: | 357-753 |
| Cow position: | chr4:16055811-16056220 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 113 |
| Conread position: | 364-759 |
| Cow position: | chr4:1464688-1464307 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 402-753 |
| Cow position: | chr4:40824988-40824630 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 402-759 |
| Cow position: | chr4:6449621-6449270 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 403-735 |
| Cow position: | chr4:3829762-3830079 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 209, 25 |
| Conread position: | 403-754 |
| Cow position: | chr4:11383694-11384027 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 261, 65 |
| Conread position: | 423-759 |
| Cow position: | chr4:12241938-12241598 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 431-755 |
| Cow position: | chr4:47718299-47717990 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 434-755 |
| Cow position: | chr4:54190170-54190472 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 447-749 |
| Cow position: | chr4:17926947-17926643 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 21 |
| Conread position: | 463-674 |
| Cow position: | chr4:11617760-11617977 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 208 |
| Conread position: | 483-733 |
| Cow position: | chr4:60265445-60265191 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 79 |
| Conread position: | 484-735 |
| Cow position: | chr4:1497410-1497155 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 139 |
| Conread position: | 505-758 |
| Cow position: | chr4:27442460-27442710 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 155, 52 |
| Conread position: | 519-753 |
| Cow position: | chr4:32211544-32211783 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 555-753 |
| Cow position: | chr4:18425102-18424904 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 195, 14 |
| Conread position: | 572-754 |
| Cow position: | chr4:66179554-66179372 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 602-756 |
| Cow position: | chr4:12608040-12607886 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 62, 16 |
Show alignments to all cow chromosomes.