Cow genome map
| Conread name: | Lng1-LNG010103A02 | 
| Conread position: | 236-701 | 
| Cow position: | chr6:24238398-24238847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 427, 29 | 
| Conread position: | 236-759 | 
| Cow position: | chr6:912978-913486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 238-767 | 
| Cow position: | chr6:16671733-16672252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 68, 117 | 
| Conread position: | 243-749 | 
| Cow position: | chr6:3890138-3889632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 105 | 
| Conread position: | 244-547 | 
| Cow position: | chr6:62489365-62489068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 18, 28 | 
| Conread position: | 244-574 | 
| Cow position: | chr6:37477585-37477911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 18, 154 | 
| Conread position: | 244-769 | 
| Cow position: | chr6:65900564-65900050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 95 | 
| Conread position: | 246-530 | 
| Cow position: | chr6:476453-476720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 246-725 | 
| Cow position: | chr6:7180306-7179855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 144 | 
| Conread position: | 246-749 | 
| Cow position: | chr6:15281190-15280695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 126 | 
| Conread position: | 247-749 | 
| Cow position: | chr6:50498091-50497611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 416, 18 | 
| Conread position: | 251-615 | 
| Cow position: | chr6:2111591-2111246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 251-690 | 
| Cow position: | chr6:52150-51730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-732 | 
| Cow position: | chr6:11278333-11277870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 251-732 | 
| Cow position: | chr6:21686264-21686722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 251-743 | 
| Cow position: | chr6:8201094-8201574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 406, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:1823877-1823402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:3278588-3278103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:5951873-5951389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:20561738-20561262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:27530633-27530155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:30275808-30275331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:35877354-35876871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 13 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:36525407-36525890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:39437000-39437488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 251-749 | 
| Cow position: | chr6:55544965-55544479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 14 | 
| Conread position: | 251-753 | 
| Cow position: | chr6:65880222-65880718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 14 | 
| Conread position: | 251-759 | 
| Cow position: | chr6:28274354-28274841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 251-759 | 
| Cow position: | chr6:34893645-34893152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 14 | 
| Conread position: | 251-759 | 
| Cow position: | chr6:40555248-40554735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 298, 14 | 
| Conread position: | 252-744 | 
| Cow position: | chr6:21971040-21971516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 411, 13 | 
| Conread position: | 253-749 | 
| Cow position: | chr6:3489028-3488553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 406, 12 | 
| Conread position: | 254-749 | 
| Cow position: | chr6:47044062-47043584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 117 | 
| Conread position: | 259-572 | 
| Cow position: | chr6:734511-734835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 131, 155 | 
| Conread position: | 261-749 | 
| Cow position: | chr6:44151205-44150710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 169 | 
| Conread position: | 261-753 | 
| Cow position: | chr6:1405890-1405384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 225 | 
| Conread position: | 261-753 | 
| Cow position: | chr6:2554048-2554560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 419 | 
| Conread position: | 261-753 | 
| Cow position: | chr6:39907493-39908002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 153 | 
| Conread position: | 261-754 | 
| Cow position: | chr6:19453312-19453775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 0 | 
| Conread position: | 261-762 | 
| Cow position: | chr6:30478455-30478952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 203 | 
| Conread position: | 262-755 | 
| Cow position: | chr6:38231637-38232129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 118 | 
| Conread position: | 266-605 | 
| Cow position: | chr6:13318310-13317986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 266-753 | 
| Cow position: | chr6:65822755-65822274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 83 | 
| Conread position: | 268-749 | 
| Cow position: | chr6:15141793-15141328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 102 | 
| Conread position: | 268-749 | 
| Cow position: | chr6:65840965-65841442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 103 | 
| Conread position: | 268-754 | 
| Cow position: | chr6:6477083-6476602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 395, 24 | 
| Conread position: | 268-754 | 
| Cow position: | chr6:40314257-40314754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 286 | 
| Conread position: | 268-755 | 
| Cow position: | chr6:66231194-66231657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 88 | 
| Conread position: | 280-749 | 
| Cow position: | chr6:27468656-27469101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 290-650 | 
| Cow position: | chr6:52735794-52736147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 114, 80 | 
| Conread position: | 291-703 | 
| Cow position: | chr6:43795324-43794907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 61 | 
| Conread position: | 291-753 | 
| Cow position: | chr6:44028424-44028900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 198 | 
| Conread position: | 291-770 | 
| Cow position: | chr6:13977909-13978392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 139 | 
| Conread position: | 299-755 | 
| Cow position: | chr6:12093454-12093009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 355-754 | 
| Cow position: | chr6:33388262-33388686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 335 | 
| Conread position: | 356-632 | 
| Cow position: | chr6:21836659-21836372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 23, 115 | 
| Conread position: | 356-701 | 
| Cow position: | chr6:41757531-41757186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 67 | 
| Conread position: | 356-702 | 
| Cow position: | chr6:6935672-6935324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:2374163-2374556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 115 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:7142012-7141619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 101 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:13103512-13103910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:17598828-17598427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 199, 18 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:26671412-26671011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 199 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:27169029-27169429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 304, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:28062804-28063190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 18 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:28492058-28491661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 35 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:34126804-34127201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:40274711-40275111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 7 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:43617168-43617569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:45671722-45672117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:57870551-57870151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 114 | 
| Conread position: | 356-753 | 
| Cow position: | chr6:68026234-68026634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 112 | 
| Conread position: | 356-770 | 
| Cow position: | chr6:332026-331597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 114 | 
| Conread position: | 363-738 | 
| Cow position: | chr6:25357132-25357509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 47, 7 | 
| Conread position: | 367-735 | 
| Cow position: | chr6:51190011-51190373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 36, 91 | 
| Conread position: | 370-754 | 
| Cow position: | chr6:68362848-68362467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 44 | 
| Conread position: | 373-749 | 
| Cow position: | chr6:64713019-64713389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 57 | 
| Conread position: | 373-749 | 
| Cow position: | chr6:64714586-64714963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 57 | 
| Conread position: | 386-671 | 
| Cow position: | chr6:33459058-33459352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 36, 26 | 
| Conread position: | 386-754 | 
| Cow position: | chr6:65908916-65909279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 274, 86 | 
| Conread position: | 388-753 | 
| Cow position: | chr6:13943398-13943763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 82 | 
| Conread position: | 388-754 | 
| Cow position: | chr6:59919789-59919426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 26 | 
| Conread position: | 391-749 | 
| Cow position: | chr6:701440-701804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 44 | 
| Conread position: | 392-754 | 
| Cow position: | chr6:65007334-65007690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 22 | 
| Conread position: | 393-672 | 
| Cow position: | chr6:28106271-28106002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 394-714 | 
| Cow position: | chr6:39161704-39162012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 17, 40 | 
| Conread position: | 396-739 | 
| Cow position: | chr6:42926865-42927222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 40 | 
| Conread position: | 402-754 | 
| Cow position: | chr6:6566111-6566465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 254, 66 | 
| Conread position: | 403-758 | 
| Cow position: | chr6:1384342-1383989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 171, 58 | 
| Conread position: | 403-758 | 
| Cow position: | chr6:42360166-42359823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 256, 69 | 
| Conread position: | 404-739 | 
| Cow position: | chr6:52803920-52804252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 7, 153 | 
| Conread position: | 410-749 | 
| Cow position: | chr6:17045570-17045906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 58 | 
| Conread position: | 410-749 | 
| Cow position: | chr6:29311001-29311338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 0 | 
| Conread position: | 419-754 | 
| Cow position: | chr6:10054139-10054466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 50 | 
| Conread position: | 435-729 | 
| Cow position: | chr6:60384528-60384815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 125, 33 | 
| Conread position: | 447-754 | 
| Cow position: | chr6:65927489-65927789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 449-755 | 
| Cow position: | chr6:35421014-35420727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 450-754 | 
| Cow position: | chr6:42723373-42723072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 18 | 
| Conread position: | 450-758 | 
| Cow position: | chr6:11353285-11353598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 152, 23 | 
| Conread position: | 451-753 | 
| Cow position: | chr6:58409360-58409060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 212, 19 | 
| Conread position: | 457-763 | 
| Cow position: | chr6:2955397-2955093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 215, 11 | 
| Conread position: | 463-611 | 
| Cow position: | chr6:13276118-13276267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 463-733 | 
| Cow position: | chr6:2401801-2402083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 54, 191 | 
| Conread position: | 464-749 | 
| Cow position: | chr6:8761741-8761453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 199, 0 | 
| Conread position: | 470-754 | 
| Cow position: | chr6:28474275-28474559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 80, 141 | 
| Conread position: | 502-751 | 
| Cow position: | chr6:12095752-12095505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 162, 82 | 
| Conread position: | 504-735 | 
| Cow position: | chr6:20496310-20496534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 159, 53 | 
| Conread position: | 504-753 | 
| Cow position: | chr6:59741451-59741199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 6, 21 | 
| Conread position: | 562-749 | 
| Cow position: | chr6:37115797-37115986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 97, 7 | 
| Conread position: | 612-756 | 
| Cow position: | chr6:13317776-13317631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 620-753 | 
| Cow position: | chr6:7866871-7867008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 44, 0 | 
Show alignments to all cow chromosomes.
