Cow genome map

Conread name: Lng1-LNG010103A02

Conread position: 236-693
Cow position: chr7:34148545-34148988 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 29

Conread position: 237-749
Cow position: chr7:8145800-8145301 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 28

Conread position: 238-747
Cow position: chr7:46902639-46902141 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 83

Conread position: 244-616
Cow position: chr7:21242663-21242300 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 244-720
Cow position: chr7:53014935-53015392 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 147

Conread position: 246-749
Cow position: chr7:21235564-21235074 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 19

Conread position: 246-754
Cow position: chr7:49290025-49290537 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 248-391
Cow position: chr7:21251775-21251630 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 248-632
Cow position: chr7:30156856-30156471 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 215

Conread position: 248-763
Cow position: chr7:48632849-48633347 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 39

Conread position: 249-641
Cow position: chr7:47049879-47050247 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 250-393
Cow position: chr7:993717-993862 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 250-576
Cow position: chr7:68779411-68779094 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 112

Conread position: 251-534
Cow position: chr7:10431939-10431666 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 111

Conread position: 251-749
Cow position: chr7:447168-446694 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 14

Conread position: 251-749
Cow position: chr7:1373197-1372715 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-749
Cow position: chr7:14140141-14139659 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 14

Conread position: 251-749
Cow position: chr7:21984851-21985336 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 14

Conread position: 251-749
Cow position: chr7:24809016-24808530 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 14

Conread position: 251-750
Cow position: chr7:67425829-67426357 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 251-755
Cow position: chr7:27786084-27786567 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 251-755
Cow position: chr7:53990210-53990685 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 17

Conread position: 251-769
Cow position: chr7:64242484-64241984 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 507, 14

Conread position: 251-771
Cow position: chr7:21128192-21127697 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 14

Conread position: 252-739
Cow position: chr7:34485364-34485839 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 13

Conread position: 252-754
Cow position: chr7:3154230-3154724 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 13

Conread position: 253-671
Cow position: chr7:13538274-13537871 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 253-696
Cow position: chr7:38396679-38397112 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 260-667
Cow position: chr7:20107080-20106698 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 11

Conread position: 261-457
Cow position: chr7:67416531-67416730 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 261-728
Cow position: chr7:25438967-25439440 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 178

Conread position: 261-753
Cow position: chr7:11467299-11466795 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 93

Conread position: 261-754
Cow position: chr7:41489604-41490061 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 189

Conread position: 261-758
Cow position: chr7:51013431-51013915 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 107

Conread position: 262-393
Cow position: chr7:68858868-68858738 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 265-716
Cow position: chr7:1358201-1357765 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 175

Conread position: 268-749
Cow position: chr7:67798323-67798789 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 102

Conread position: 271-753
Cow position: chr7:1448961-1449426 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 271-755
Cow position: chr7:27143805-27144270 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 98

Conread position: 274-754
Cow position: chr7:26883617-26884072 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 325
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 89, 15

Conread position: 279-750
Cow position: chr7:63020327-63020791 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 38

Conread position: 280-749
Cow position: chr7:54602328-54602788 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 38

Conread position: 280-749
Cow position: chr7:55538437-55537980 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 64

Conread position: 282-679
Cow position: chr7:20429530-20429146 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 388, 118

Conread position: 283-668
Cow position: chr7:29371279-29370910 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 93

Conread position: 291-753
Cow position: chr7:26025518-26025981 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 302-753
Cow position: chr7:20799948-20799500 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 111

Conread position: 308-557
Cow position: chr7:33406703-33406465 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 245, 62

Conread position: 308-749
Cow position: chr7:39791243-39791677 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 62

Conread position: 308-758
Cow position: chr7:29469368-29469810 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 124

Conread position: 309-757
Cow position: chr7:39109210-39108777 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 123

Conread position: 310-711
Cow position: chr7:1736667-1736285 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 266, 76

Conread position: 326-753
Cow position: chr7:21309741-21310150 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 97

Conread position: 334-739
Cow position: chr7:20294400-20294799 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 12

Conread position: 356-669
Cow position: chr7:6720090-6720403 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 238, 114

Conread position: 356-752
Cow position: chr7:63384896-63385290 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 112

Conread position: 356-753
Cow position: chr7:17328-16930 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 78

Conread position: 356-753
Cow position: chr7:3235140-3234741 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 78

Conread position: 356-753
Cow position: chr7:3301612-3301212 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 356-753
Cow position: chr7:6643330-6642936 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 114

Conread position: 356-753
Cow position: chr7:6649111-6648713 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr7:20529153-20528733 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 198, 67

Conread position: 356-753
Cow position: chr7:20555239-20555656 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 114

Conread position: 356-753
Cow position: chr7:27102568-27102172 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 114

Conread position: 356-753
Cow position: chr7:47374539-47374939 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 114

Conread position: 356-753
Cow position: chr7:61558756-61559155 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 70

Conread position: 386-732
Cow position: chr7:59027599-59027938 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 177, 39

Conread position: 391-755
Cow position: chr7:52120502-52120136 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 10, 39

Conread position: 398-753
Cow position: chr7:38536104-38536459 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 399-725
Cow position: chr7:35298011-35297685 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 71

Conread position: 401-735
Cow position: chr7:30119948-30119614 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 148, 24

Conread position: 402-767
Cow position: chr7:750516-750888 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 148, 65

Conread position: 403-670
Cow position: chr7:32189883-32189615 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 82

Conread position: 405-754
Cow position: chr7:35287971-35287618 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 261

Conread position: 410-750
Cow position: chr7:1400752-1400423 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 26

Conread position: 410-755
Cow position: chr7:522240-521901 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 28

Conread position: 412-617
Cow position: chr7:31864461-31864656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 418-733
Cow position: chr7:5661962-5662297 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 112, 50

Conread position: 419-754
Cow position: chr7:27531253-27530921 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 54

Conread position: 419-770
Cow position: chr7:55281192-55280843 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 152

Conread position: 433-755
Cow position: chr7:26890426-26890744 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 434-658
Cow position: chr7:68907231-68907460 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 131, 34

Conread position: 436-751
Cow position: chr7:62680033-62679704 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 138, 32

Conread position: 439-714
Cow position: chr7:25686580-25686312 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 213, 31

Conread position: 443-748
Cow position: chr7:19925181-19924878 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 443-758
Cow position: chr7:67416674-67416991 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 25

Conread position: 447-735
Cow position: chr7:68858458-68858169 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 21

Conread position: 449-739
Cow position: chr7:59136067-59136359 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 20

Conread position: 450-709
Cow position: chr7:68076178-68076434 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 180, 18

Conread position: 450-754
Cow position: chr7:37416658-37416960 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 103

Conread position: 456-744
Cow position: chr7:41870284-41869999 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 56

Conread position: 462-732
Cow position: chr7:24055940-24056207 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 44

Conread position: 463-754
Cow position: chr7:36084982-36085279 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 74

Conread position: 466-754
Cow position: chr7:21976084-21975793 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 471-749
Cow position: chr7:45949492-45949210 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 474-749
Cow position: chr7:51911692-51911416 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 223

Conread position: 477-754
Cow position: chr7:68436382-68436103 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 90

Conread position: 479-770
Cow position: chr7:11446221-11446517 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 78

Conread position: 490-759
Cow position: chr7:993912-994183 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 16

Conread position: 541-753
Cow position: chr7:23816240-23816028 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 209, 39

Conread position: 550-755
Cow position: chr7:26893485-26893693 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 564-754
Cow position: chr7:6489559-6489368 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 569-755
Cow position: chr7:68778624-68778420 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 580-749
Cow position: chr7:33406478-33406305 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 581-732
Cow position: chr7:61349797-61349643 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 23

Conread position: 613-719
Cow position: chr7:30156439-30156331 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 34

Show alignments to all cow chromosomes.