Cow genome map
| Conread name: | Lng1-LNG010110B04 |
| Conread position: | 83-285 |
| Cow position: | chr26:17057685-17057894 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 85-302 |
| Cow position: | chr26:13863023-13862803 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 88-292 |
| Cow position: | chr26:10700886-10700677 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 90-285 |
| Cow position: | chr26:19636307-19636509 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 149 |
| Conread position: | 90-286 |
| Cow position: | chr26:14905793-14905596 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 5 |
| Conread position: | 93-282 |
| Cow position: | chr26:20769868-20770066 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 98-276 |
| Cow position: | chr26:22429805-22429634 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 98-280 |
| Cow position: | chr26:16783850-16784041 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 99-299 |
| Cow position: | chr26:13614628-13614431 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 100-294 |
| Cow position: | chr26:27482538-27482333 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 103-286 |
| Cow position: | chr26:16796178-16795992 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 103-295 |
| Cow position: | chr26:8307500-8307301 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 103-297 |
| Cow position: | chr26:18825255-18825052 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 104-292 |
| Cow position: | chr26:24240709-24240906 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 159 |
| Conread position: | 105-269 |
| Cow position: | chr26:35704418-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 105-271 |
| Cow position: | chr26:29889481-29889309 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 105-279 |
| Cow position: | chr26:32897839-32897666 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 105-283 |
| Cow position: | chr26:15132667-15132858 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 105-284 |
| Cow position: | chr26:26888103-26887919 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 105-285 |
| Cow position: | chr26:20291662-20291473 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 105-285 |
| Cow position: | chr26:23924880-23925063 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 105-286 |
| Cow position: | chr26:31137434-31137245 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 105-287 |
| Cow position: | chr26:25526279-25526468 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 105-288 |
| Cow position: | chr26:9491955-9492141 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 105-288 |
| Cow position: | chr26:21637007-21636829 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 105-292 |
| Cow position: | chr26:32566041-32566234 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 181 |
| Conread position: | 105-292 |
| Cow position: | chr26:34611151-34610961 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 105-293 |
| Cow position: | chr26:12893397-12893202 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 105-293 |
| Cow position: | chr26:33038193-33037999 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 105-293 |
| Cow position: | chr26:33202040-33201843 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 105-295 |
| Cow position: | chr26:14481524-14481335 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 105-296 |
| Cow position: | chr26:33466408-33466218 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 105-304 |
| Cow position: | chr26:7525173-7524973 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 166 |
| Conread position: | 105-309 |
| Cow position: | chr26:8341526-8341730 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 106-275 |
| Cow position: | chr26:20825087-20824913 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 106-293 |
| Cow position: | chr26:6487760-6487564 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 106-302 |
| Cow position: | chr26:6514874-6515068 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 107-277 |
| Cow position: | chr26:22892413-22892236 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 107-290 |
| Cow position: | chr26:19591515-19591706 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 107-290 |
| Cow position: | chr26:34724839-34724650 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 107-302 |
| Cow position: | chr26:7687213-7687005 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 111-277 |
| Cow position: | chr26:26950416-26950250 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 135 |
| Conread position: | 111-281 |
| Cow position: | chr26:33112350-33112171 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 174 |
| Conread position: | 111-291 |
| Cow position: | chr26:34560135-34559947 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 111-297 |
| Cow position: | chr26:5666084-5666271 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 116-277 |
| Cow position: | chr26:28423327-28423497 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 116-302 |
| Cow position: | chr26:28251197-28251392 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 120-287 |
| Cow position: | chr26:29901013-29900839 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 122-269 |
| Cow position: | chr26:22176693-22176835 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 122-282 |
| Cow position: | chr26:21243145-21243303 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 122-288 |
| Cow position: | chr26:7224292-7224131 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 122-288 |
| Cow position: | chr26:9099482-9099311 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 123-277 |
| Cow position: | chr26:24521049-24520890 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 125-264 |
| Cow position: | chr26:29897240-29897382 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 131 |
| Conread position: | 125-276 |
| Cow position: | chr26:5836767-5836607 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 125-279 |
| Cow position: | chr26:13802164-13802322 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 125-279 |
| Cow position: | chr26:14032380-14032236 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 125-284 |
| Cow position: | chr26:31382373-31382533 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 125-286 |
| Cow position: | chr26:16585488-16585648 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 125-288 |
| Cow position: | chr26:31712015-31711842 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 125-290 |
| Cow position: | chr26:12145065-12144891 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 125-293 |
| Cow position: | chr26:12807247-12807079 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 125-293 |
| Cow position: | chr26:32503289-32503117 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 125-296 |
| Cow position: | chr26:5749884-5749712 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 125-297 |
| Cow position: | chr26:4854598-4854775 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 125-297 |
| Cow position: | chr26:13018336-13018171 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 125-300 |
| Cow position: | chr26:647673-647487 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 125-319 |
| Cow position: | chr26:26504788-26504984 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 126-297 |
| Cow position: | chr26:32517403-32517236 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 127-282 |
| Cow position: | chr26:25407449-25407598 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 127-296 |
| Cow position: | chr26:9535573-9535745 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 129-285 |
| Cow position: | chr26:11800270-11800426 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 9 |
| Conread position: | 129-296 |
| Cow position: | chr26:33253259-33253086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 129-297 |
| Cow position: | chr26:21320003-21320177 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 135-275 |
| Cow position: | chr26:31888795-31888939 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 136-297 |
| Cow position: | chr26:31973479-31973635 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 137-299 |
| Cow position: | chr26:12891906-12891740 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 140-297 |
| Cow position: | chr26:17465037-17464885 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 141-317 |
| Cow position: | chr26:13022531-13022715 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 147-293 |
| Cow position: | chr26:13800585-13800737 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 148-284 |
| Cow position: | chr26:12537464-12537325 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 214-291 |
| Cow position: | chr26:12964533-12964456 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 71 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.