Cow genome map
| Conread name: | LyN1-MLN01A080063 |
| Conread position: | 29-390 |
| Cow position: | chr11:81576236-81575881 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 187-390 |
| Cow position: | chr11:23572394-23572194 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 420-658 |
| Cow position: | chr11:40574569-40574330 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 422-633 |
| Cow position: | chr11:21893275-21893067 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 423-656 |
| Cow position: | chr11:10877451-10877693 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 202 |
| Conread position: | 425-651 |
| Cow position: | chr11:35251782-35251553 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 425-654 |
| Cow position: | chr11:58793794-58793572 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 425-658 |
| Cow position: | chr11:55119674-55119910 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 425-661 |
| Cow position: | chr11:8087949-8087717 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 425-693 |
| Cow position: | chr11:82529073-82529332 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 428-646 |
| Cow position: | chr11:77820068-77819846 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 428-652 |
| Cow position: | chr11:22851251-22851476 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 428-653 |
| Cow position: | chr11:34761512-34761295 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 428-657 |
| Cow position: | chr11:24008307-24008535 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 428-658 |
| Cow position: | chr11:18452935-18452704 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 428-662 |
| Cow position: | chr11:25856410-25856636 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 429-633 |
| Cow position: | chr11:21544260-21544464 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 429-651 |
| Cow position: | chr11:18891150-18891367 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 430-619 |
| Cow position: | chr11:18293546-18293736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 445-613 |
| Cow position: | chr11:55354463-55354286 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 445-658 |
| Cow position: | chr11:57062093-57062304 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 445-662 |
| Cow position: | chr11:43831580-43831358 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 450-656 |
| Cow position: | chr11:11109878-11109667 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 170 |
| Conread position: | 464-638 |
| Cow position: | chr11:40144894-40144721 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 466-663 |
| Cow position: | chr11:15885546-15885743 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 468-636 |
| Cow position: | chr11:25379604-25379436 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 127 |
| Conread position: | 472-639 |
| Cow position: | chr11:80002984-80003153 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 476-636 |
| Cow position: | chr11:45430304-45430461 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 478-641 |
| Cow position: | chr11:58579869-58580035 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 480-636 |
| Cow position: | chr11:77193770-77193615 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 137 |
| Conread position: | 487-650 |
| Cow position: | chr11:34303738-34303899 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 493-618 |
| Cow position: | chr11:16793662-16793535 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 51, 82 |
Show alignments to all cow chromosomes.