Cow genome map
| Conread name: | LyN1-MLN01A080063 |
| Conread position: | 14-388 |
| Cow position: | chr13:61976499-61976864 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 19-389 |
| Cow position: | chr13:25062881-25062508 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 26-636 |
| Cow position: | chr13:11571145-11570550 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 27-386 |
| Cow position: | chr13:15446497-15446150 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 48-390 |
| Cow position: | chr13:16344137-16343785 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 266-390 |
| Cow position: | chr13:25005170-25005294 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 299-644 |
| Cow position: | chr13:21826277-21826601 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 182, 45 |
| Conread position: | 423-652 |
| Cow position: | chr13:34931495-34931713 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 423-661 |
| Cow position: | chr13:25955397-25955158 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 191 |
| Conread position: | 425-649 |
| Cow position: | chr13:47325662-47325434 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 425-650 |
| Cow position: | chr13:21878451-21878223 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 425-651 |
| Cow position: | chr13:34264863-34264642 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 425-662 |
| Cow position: | chr13:33239742-33239987 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 425-665 |
| Cow position: | chr13:17169432-17169664 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 428-643 |
| Cow position: | chr13:15731334-15731116 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 428-652 |
| Cow position: | chr13:46464586-46464367 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 150 |
| Conread position: | 428-653 |
| Cow position: | chr13:55406901-55407124 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 428-659 |
| Cow position: | chr13:12325346-12325564 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 428-670 |
| Cow position: | chr13:51240961-51241198 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 429-661 |
| Cow position: | chr13:24675891-24676132 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 183 |
| Conread position: | 430-662 |
| Cow position: | chr13:5619433-5619212 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 16 |
| Conread position: | 432-694 |
| Cow position: | chr13:20656558-20656832 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 445-661 |
| Cow position: | chr13:19115663-19115877 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 447-626 |
| Cow position: | chr13:34502224-34502404 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 452-626 |
| Cow position: | chr13:11523063-11522889 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 458-646 |
| Cow position: | chr13:26943071-26943257 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 461-653 |
| Cow position: | chr13:14080179-14079989 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 461-658 |
| Cow position: | chr13:34885242-34885444 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 154 |
| Conread position: | 461-658 |
| Cow position: | chr13:38535122-38534930 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 463-627 |
| Cow position: | chr13:33767780-33767619 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 463-656 |
| Cow position: | chr13:11223151-11222964 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 463-694 |
| Cow position: | chr13:43803193-43803425 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 465-693 |
| Cow position: | chr13:12213752-12213972 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 475-640 |
| Cow position: | chr13:17127472-17127306 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 74, 142 |
| Conread position: | 494-662 |
| Cow position: | chr13:28605717-28605883 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 5 |
Show alignments to all cow chromosomes.