Cow genome map
| Conread name: | LyN1-MLN01A080063 |
| Conread position: | 13-389 |
| Cow position: | chr5:41546349-41545978 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 14-394 |
| Cow position: | chr5:62427808-62428183 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 14-395 |
| Cow position: | chr5:694118-694501 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 15-388 |
| Cow position: | chr5:21828400-21828776 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 49-394 |
| Cow position: | chr5:74550044-74550386 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 417-647 |
| Cow position: | chr5:14072339-14072116 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 425-606 |
| Cow position: | chr5:10455618-10455791 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 425-658 |
| Cow position: | chr5:57965053-57964824 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 428-628 |
| Cow position: | chr5:6149782-6149576 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 428-652 |
| Cow position: | chr5:57127696-57127921 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 428-676 |
| Cow position: | chr5:53599809-53599559 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 431-661 |
| Cow position: | chr5:53922285-53922073 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 445-642 |
| Cow position: | chr5:51360903-51361100 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 445-652 |
| Cow position: | chr5:21145974-21145759 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 449-633 |
| Cow position: | chr5:11955530-11955343 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 170 |
| Conread position: | 463-650 |
| Cow position: | chr5:25925591-25925403 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 466-641 |
| Cow position: | chr5:55985531-55985354 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 467-661 |
| Cow position: | chr5:26161708-26161522 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 467-680 |
| Cow position: | chr5:60968717-60968931 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 119 |
| Conread position: | 485-644 |
| Cow position: | chr5:28371092-28370930 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 485-661 |
| Cow position: | chr5:35748846-35749018 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 486-635 |
| Cow position: | chr5:53914857-53914710 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 112 |
| Conread position: | 487-633 |
| Cow position: | chr5:44491619-44491767 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 487-636 |
| Cow position: | chr5:7659636-7659485 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 488-644 |
| Cow position: | chr5:44380460-44380611 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 494-633 |
| Cow position: | chr5:18582822-18582962 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 494-656 |
| Cow position: | chr5:13575434-13575279 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.