Cow genome map
| Conread name: | LyN1-MLN01A080063 |
| Conread position: | 11-395 |
| Cow position: | chr6:12629573-12629955 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 17-634 |
| Cow position: | chr6:55141124-55140486 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 22-389 |
| Cow position: | chr6:1891294-1890919 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 49-390 |
| Cow position: | chr6:66363655-66363320 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 55-389 |
| Cow position: | chr6:49399021-49398689 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 84-393 |
| Cow position: | chr6:10253847-10254170 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 87-401 |
| Cow position: | chr6:16492277-16491982 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 292, 27 |
| Conread position: | 143-390 |
| Cow position: | chr6:32858581-32858824 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 173-388 |
| Cow position: | chr6:46627030-46627237 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 79 |
| Conread position: | 190-644 |
| Cow position: | chr6:29299575-29300035 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 316 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 36, 197 |
| Conread position: | 421-636 |
| Cow position: | chr6:2665503-2665286 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 425-606 |
| Cow position: | chr6:6244657-6244474 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 428-653 |
| Cow position: | chr6:41557740-41557972 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 428-661 |
| Cow position: | chr6:3374171-3373928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 430-653 |
| Cow position: | chr6:62754224-62754001 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 445-635 |
| Cow position: | chr6:46250712-46250522 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 445-636 |
| Cow position: | chr6:12516112-12516307 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 445-658 |
| Cow position: | chr6:41157505-41157718 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 445-662 |
| Cow position: | chr6:1077142-1076921 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 447-663 |
| Cow position: | chr6:66840142-66840366 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 452-652 |
| Cow position: | chr6:55662017-55662225 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 458-628 |
| Cow position: | chr6:46627297-46627470 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 459-658 |
| Cow position: | chr6:44377563-44377761 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 461-665 |
| Cow position: | chr6:32428742-32428942 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 467-639 |
| Cow position: | chr6:30499121-30499298 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 153 |
| Conread position: | 467-658 |
| Cow position: | chr6:31687887-31687695 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 467-668 |
| Cow position: | chr6:66677016-66677226 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 156 |
| Conread position: | 470-641 |
| Cow position: | chr6:4728929-4728758 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 475-636 |
| Cow position: | chr6:27222183-27222344 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 493-657 |
| Cow position: | chr6:22098334-22098176 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 493-690 |
| Cow position: | chr6:812078-811884 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 119 |
Show alignments to all cow chromosomes.