Cow genome map
| Conread name: | LyN1-MLN01A080063 |
| Conread position: | 8-390 |
| Cow position: | chr9:8778681-8779095 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 14-395 |
| Cow position: | chr9:8387748-8388124 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 14-407 |
| Cow position: | chr9:47926421-47926035 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 15-390 |
| Cow position: | chr9:29808974-29808605 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 92-390 |
| Cow position: | chr9:64453684-64453979 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 160 |
| Conread position: | 319-627 |
| Cow position: | chr9:41904341-41904036 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 422-661 |
| Cow position: | chr9:41318177-41318413 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 425-636 |
| Cow position: | chr9:39001570-39001359 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 425-655 |
| Cow position: | chr9:9077301-9077533 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 425-659 |
| Cow position: | chr9:35527523-35527283 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 425-660 |
| Cow position: | chr9:9539398-9539166 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 428-646 |
| Cow position: | chr9:34188773-34188567 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 428-665 |
| Cow position: | chr9:18570581-18570823 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 428-693 |
| Cow position: | chr9:53597000-53597270 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 432-652 |
| Cow position: | chr9:1526992-1527221 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 191 |
| Conread position: | 442-661 |
| Cow position: | chr9:34763068-34763283 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 444-654 |
| Cow position: | chr9:36508298-36508508 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 445-636 |
| Cow position: | chr9:1281318-1281517 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 160 |
| Conread position: | 445-636 |
| Cow position: | chr9:24886504-24886698 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 174 |
| Conread position: | 445-637 |
| Cow position: | chr9:31540127-31540324 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 449-626 |
| Cow position: | chr9:33078214-33078395 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 166 |
| Conread position: | 450-627 |
| Cow position: | chr9:5607768-5607588 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 451-640 |
| Cow position: | chr9:32688712-32688902 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 167 |
| Conread position: | 461-661 |
| Cow position: | chr9:15855271-15855466 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 463-629 |
| Cow position: | chr9:40858921-40859085 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 464-639 |
| Cow position: | chr9:26862662-26862485 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 476-645 |
| Cow position: | chr9:55355793-55355623 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 485-644 |
| Cow position: | chr9:42740061-42739899 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 150 |
| Conread position: | 487-632 |
| Cow position: | chr9:20180850-20180712 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 494-694 |
| Cow position: | chr9:12183455-12183266 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 496-640 |
| Cow position: | chr9:55262518-55262663 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 121 |
Show alignments to all cow chromosomes.