Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 11-402 |
| Cow position: | chr10:44293577-44293189 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 11-461 |
| Cow position: | chr10:53320123-53319677 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 169 |
| Conread position: | 11-853 |
| Cow position: | chr10:57297513-57296689 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 530 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 130 |
| Conread position: | 11-870 |
| Cow position: | chr10:40150026-40149163 (view UCSC Genome Browser custom track) |
| Alignm length: | 895 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 12-478 |
| Cow position: | chr10:57090158-57090618 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 12-559 |
| Cow position: | chr10:29844523-29843996 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 57 |
| Conread position: | 12-853 |
| Cow position: | chr10:32318589-32319414 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 13-372 |
| Cow position: | chr10:54127688-54128050 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 13-774 |
| Cow position: | chr10:33221689-33220927 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 13-870 |
| Cow position: | chr10:62406635-62405769 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 146 |
| Conread position: | 16-280 |
| Cow position: | chr10:25003900-25004165 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 16-324 |
| Cow position: | chr10:19720967-19720660 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 16-331 |
| Cow position: | chr10:36448299-36448611 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 16-361 |
| Cow position: | chr10:22347101-22347432 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 16-362 |
| Cow position: | chr10:31022759-31022408 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-372 |
| Cow position: | chr10:20374275-20373914 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 16-432 |
| Cow position: | chr10:12546121-12546541 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-477 |
| Cow position: | chr10:15488681-15489138 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 16-479 |
| Cow position: | chr10:57479515-57479070 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 16-481 |
| Cow position: | chr10:923640-923175 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 16-487 |
| Cow position: | chr10:48745674-48745203 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 16-559 |
| Cow position: | chr10:5868418-5867879 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-637 |
| Cow position: | chr10:38343234-38342591 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-679 |
| Cow position: | chr10:2118890-2118215 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-783 |
| Cow position: | chr10:51950957-51950181 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 16-829 |
| Cow position: | chr10:33425414-33424594 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 16-831 |
| Cow position: | chr10:24100940-24100133 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 16-837 |
| Cow position: | chr10:38842301-38843136 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 163 |
| Conread position: | 16-844 |
| Cow position: | chr10:46762350-46763178 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 16-850 |
| Cow position: | chr10:40348518-40347676 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 16-850 |
| Cow position: | chr10:41569245-41570086 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-853 |
| Cow position: | chr10:39263818-39264654 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 68 |
| Conread position: | 16-861 |
| Cow position: | chr10:22343606-22344457 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr10:37772028-37772879 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 16-870 |
| Cow position: | chr10:1379638-1380502 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 16-870 |
| Cow position: | chr10:8292267-8293132 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 16-870 |
| Cow position: | chr10:10584278-10585132 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 73 |
| Conread position: | 16-870 |
| Cow position: | chr10:14333705-14332839 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr10:19142474-19141607 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr10:19841823-19842673 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 16-870 |
| Cow position: | chr10:21489086-21489940 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 16-870 |
| Cow position: | chr10:25564415-25563555 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-870 |
| Cow position: | chr10:29630122-29629266 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 151 |
| Conread position: | 16-870 |
| Cow position: | chr10:30683346-30682487 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 16-870 |
| Cow position: | chr10:34665598-34664767 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 526 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 16-870 |
| Cow position: | chr10:39814259-39813388 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 156 |
| Conread position: | 16-870 |
| Cow position: | chr10:41159556-41160417 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-870 |
| Cow position: | chr10:57555201-57554333 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 154 |
| Conread position: | 17-554 |
| Cow position: | chr10:13851281-13851823 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 17-735 |
| Cow position: | chr10:3287977-3287263 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 150 |
| Conread position: | 17-868 |
| Cow position: | chr10:48375309-48374445 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 17-870 |
| Cow position: | chr10:28031782-28030932 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 69 |
| Conread position: | 19-365 |
| Cow position: | chr10:3527267-3527621 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 24-429 |
| Cow position: | chr10:19493810-19493401 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 24-561 |
| Cow position: | chr10:53173176-53172634 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 24-869 |
| Cow position: | chr10:32702907-32703763 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 30-657 |
| Cow position: | chr10:7896331-7895691 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 59-411 |
| Cow position: | chr10:54487273-54486935 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 74-870 |
| Cow position: | chr10:39038855-39038049 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 76-785 |
| Cow position: | chr10:41708881-41708191 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 98-870 |
| Cow position: | chr10:21427075-21426301 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 53 |
| Conread position: | 102-520 |
| Cow position: | chr10:25889182-25889609 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 179, 6 |
| Conread position: | 111-870 |
| Cow position: | chr10:57987460-57986693 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 51 |
| Conread position: | 112-850 |
| Cow position: | chr10:1663720-1662985 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 51 |
| Conread position: | 134-503 |
| Cow position: | chr10:42274838-42275191 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 138-792 |
| Cow position: | chr10:35023930-35024569 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 25 |
| Conread position: | 175-853 |
| Cow position: | chr10:25263862-25264507 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 97 |
| Conread position: | 193-870 |
| Cow position: | chr10:7279779-7279099 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 93 |
| Conread position: | 198-549 |
| Cow position: | chr10:47916786-47917141 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 262-747 |
| Cow position: | chr10:49933313-49932791 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 292-774 |
| Cow position: | chr10:27123134-27122654 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 340-726 |
| Cow position: | chr10:2365098-2364720 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 348-870 |
| Cow position: | chr10:8458699-8459229 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 169, 23 |
Show alignments to all cow chromosomes.