Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-402
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               11-461
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               11-853
               

               Cow position:
               
               

               Alignm length:
               864
               

               Alignm identity:
               530
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               895
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               12-478
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               12-559
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               444, 57
               

               Conread position:
               12-853
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 150
               

               Conread position:
               13-372
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               13-774
               

               Cow position:
               
               

               Alignm length:
               788
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               13-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               16-280
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 160
               

               Conread position:
               16-324
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               16-331
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 70
               

               Conread position:
               16-362
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-372
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               16-432
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 152
               

               Conread position:
               16-479
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               16-487
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-637
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-679
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-783
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               16-829
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 155
               

               Conread position:
               16-831
               

               Cow position:
               
               

               Alignm length:
               841
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               16-837
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 163
               

               Conread position:
               16-844
               

               Cow position:
               
               

               Alignm length:
               845
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 138
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               855
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-853
               

               Cow position:
               
               

               Alignm length:
               865
               

               Alignm identity:
               593
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               16-861
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 83
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 151
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               526
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               17-554
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               17-735
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 150
               

               Conread position:
               17-868
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               439, 69
               

               Conread position:
               19-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               24-429
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 145
               

               Conread position:
               24-561
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 135
               

               Conread position:
               24-869
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               30-657
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               59-411
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               130, 44
               

               Conread position:
               74-870
               

               Cow position:
               
               

               Alignm length:
               824
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               76-785
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               98-870
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               102-520
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               179, 6
               

               Conread position:
               111-870
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 51
               

               Conread position:
               112-850
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 51
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               138-792
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 25
               

               Conread position:
               175-853
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 97
               

               Conread position:
               193-870
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 93
               

               Conread position:
               198-549
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               262-747
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               292-774
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               320
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               340-726
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               157, 35
               

               Conread position:
               348-870
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               169, 23
               
Show alignments to all cow chromosomes.