Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-372
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               60, 158
               

               Conread position:
               11-479
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               11-853
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               12-347
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 138
               

               Conread position:
               12-350
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               12-461
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               12-467
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               12-480
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               12-610
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               12-846
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               13-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               13-365
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 89
               

               Conread position:
               13-504
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               13-660
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               410
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               13-701
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 90
               

               Conread position:
               13-861
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               13-868
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 158
               

               Conread position:
               14-559
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               15-868
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               15-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               16-213
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               16-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 139
               

               Conread position:
               16-308
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 144
               

               Conread position:
               16-363
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 144
               

               Conread position:
               16-405
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               57, 139
               

               Conread position:
               16-460
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-465
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 6
               

               Conread position:
               16-496
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 164
               

               Conread position:
               16-501
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               16-626
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 140
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-700
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               16-782
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-783
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               16-786
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 323
               

               Conread position:
               16-824
               

               Cow position:
               
               

               Alignm length:
               836
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               16-837
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               16-844
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               509
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 159
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               857
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               848
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 107
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               896
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 147
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 82
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               17-717
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               17-783
               

               Cow position:
               
               

               Alignm length:
               796
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               30-666
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               408
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 129
               

               Conread position:
               32-503
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 136
               

               Conread position:
               98-539
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 194
               

               Conread position:
               101-584
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               127-772
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 27
               

               Conread position:
               139-850
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 12
               

               Conread position:
               154-869
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 119
               

               Conread position:
               173-870
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 67
               

               Conread position:
               301-708
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               222, 47
               

               Conread position:
               353-660
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 72
               

               Conread position:
               403-869
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               420-831
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               507-870
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 119
               
Show alignments to all cow chromosomes.