Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 2-298 |
| Cow position: | chr13:46528268-46528559 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 190, 70 |
| Conread position: | 11-726 |
| Cow position: | chr13:49061207-49061931 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 467 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 11-870 |
| Cow position: | chr13:21400678-21401561 (view UCSC Genome Browser custom track) |
| Alignm length: | 894 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 12-432 |
| Cow position: | chr13:8069312-8068886 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 149 |
| Conread position: | 12-819 |
| Cow position: | chr13:34509965-34509153 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 12-869 |
| Cow position: | chr13:32983553-32982687 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 137 |
| Conread position: | 12-870 |
| Cow position: | chr13:17050391-17049518 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 12-870 |
| Cow position: | chr13:30305042-30305901 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 13-544 |
| Cow position: | chr13:569273-569804 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 15-861 |
| Cow position: | chr13:28343270-28342441 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 600 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 40 |
| Conread position: | 16-311 |
| Cow position: | chr13:31732103-31731804 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 16-365 |
| Cow position: | chr13:16921308-16921662 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-387 |
| Cow position: | chr13:47575946-47576316 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 16-392 |
| Cow position: | chr13:16252669-16252293 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 16-400 |
| Cow position: | chr13:21838362-21837979 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 16-407 |
| Cow position: | chr13:31609943-31609551 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-432 |
| Cow position: | chr13:21698126-21698545 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-447 |
| Cow position: | chr13:11762787-11762354 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 16-465 |
| Cow position: | chr13:7049498-7049941 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 16-487 |
| Cow position: | chr13:4735126-4735599 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 16-559 |
| Cow position: | chr13:679627-680170 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-559 |
| Cow position: | chr13:34343758-34344306 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-559 |
| Cow position: | chr13:50191779-50191230 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-605 |
| Cow position: | chr13:4733382-4733982 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 16-605 |
| Cow position: | chr13:11389055-11389656 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 16-605 |
| Cow position: | chr13:49613686-49613091 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-617 |
| Cow position: | chr13:34018525-34017931 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 16-686 |
| Cow position: | chr13:2873211-2872543 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 418 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 16-704 |
| Cow position: | chr13:30470516-30469825 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 16-818 |
| Cow position: | chr13:41338798-41338004 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 16-836 |
| Cow position: | chr13:17310266-17311099 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-837 |
| Cow position: | chr13:11796862-11796017 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 537 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 16-850 |
| Cow position: | chr13:15279942-15279114 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-850 |
| Cow position: | chr13:34040495-34039647 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 16-869 |
| Cow position: | chr13:3313485-3314342 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 16-870 |
| Cow position: | chr13:562540-561669 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 16-870 |
| Cow position: | chr13:4943235-4944105 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr13:11827874-11827006 (view UCSC Genome Browser custom track) |
| Alignm length: | 884 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 16-870 |
| Cow position: | chr13:13901714-13902572 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 16-870 |
| Cow position: | chr13:15922608-15921742 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 16-870 |
| Cow position: | chr13:32548607-32549475 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-870 |
| Cow position: | chr13:32735344-32734471 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 282 |
| Conread position: | 16-870 |
| Cow position: | chr13:33524109-33523239 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 16-870 |
| Cow position: | chr13:34869811-34870674 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-870 |
| Cow position: | chr13:35539011-35539887 (view UCSC Genome Browser custom track) |
| Alignm length: | 884 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr13:49975526-49976385 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 21-652 |
| Cow position: | chr13:33930526-33929903 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 419 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 22-775 |
| Cow position: | chr13:1048183-1047433 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 30-516 |
| Cow position: | chr13:31729034-31728547 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 35-850 |
| Cow position: | chr13:15559203-15560031 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 124 |
| Conread position: | 64-870 |
| Cow position: | chr13:36244985-36244214 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 76-870 |
| Cow position: | chr13:3333895-3333117 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 82-519 |
| Cow position: | chr13:15884144-15883712 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 60 |
| Conread position: | 93-870 |
| Cow position: | chr13:50111401-50112181 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 154-870 |
| Cow position: | chr13:33334352-33333638 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 151 |
| Conread position: | 195-850 |
| Cow position: | chr13:24236607-24237247 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 26 |
| Conread position: | 216-501 |
| Cow position: | chr13:21906882-21906599 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 167, 72 |
| Conread position: | 216-870 |
| Cow position: | chr13:5516272-5515611 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 92 |
| Conread position: | 328-870 |
| Cow position: | chr13:36671819-36672372 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 420-815 |
| Cow position: | chr13:48644560-48644961 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 75 |
| Conread position: | 420-870 |
| Cow position: | chr13:30275160-30274717 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 456-852 |
| Cow position: | chr13:49500102-49499709 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 538-843 |
| Cow position: | chr13:6647271-6647559 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 563-802 |
| Cow position: | chr13:15335925-15336152 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 152, 61 |
Show alignments to all cow chromosomes.