Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 5-508 |
| Cow position: | chr14:14667293-14666790 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 345 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 11-670 |
| Cow position: | chr14:13463155-13463817 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 11-670 |
| Cow position: | chr14:24523665-24524333 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 12-302 |
| Cow position: | chr14:18197309-18197610 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 12-323 |
| Cow position: | chr14:34998836-34999150 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 12-520 |
| Cow position: | chr14:38813771-38813252 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 342 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 58, 395 |
| Conread position: | 12-585 |
| Cow position: | chr14:17768443-17767884 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 13-447 |
| Cow position: | chr14:43556676-43557114 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 16-264 |
| Cow position: | chr14:40511598-40511344 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-350 |
| Cow position: | chr14:17688571-17688909 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-350 |
| Cow position: | chr14:33392201-33391869 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 140 |
| Conread position: | 16-365 |
| Cow position: | chr14:16807598-16807246 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-372 |
| Cow position: | chr14:39299347-39299706 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 16-372 |
| Cow position: | chr14:41272472-41272111 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-374 |
| Cow position: | chr14:5514656-5515019 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-387 |
| Cow position: | chr14:38148833-38149207 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 16-390 |
| Cow position: | chr14:20784313-20784686 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-461 |
| Cow position: | chr14:48252603-48252155 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 16-478 |
| Cow position: | chr14:36908484-36908018 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-478 |
| Cow position: | chr14:42121859-42121390 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 16-481 |
| Cow position: | chr14:191773-192241 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 77 |
| Conread position: | 16-481 |
| Cow position: | chr14:15273830-15273363 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 16-481 |
| Cow position: | chr14:22029747-22029278 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 142 |
| Conread position: | 16-501 |
| Cow position: | chr14:7474075-7474557 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 327 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-507 |
| Cow position: | chr14:32473422-32472926 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 16-559 |
| Cow position: | chr14:50142699-50143237 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 16-560 |
| Cow position: | chr14:48826996-48827546 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 346 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 16-602 |
| Cow position: | chr14:34763433-34762843 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 16-654 |
| Cow position: | chr14:41411466-41412109 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 424 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 16-717 |
| Cow position: | chr14:46221802-46222519 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-736 |
| Cow position: | chr14:45027234-45026500 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-831 |
| Cow position: | chr14:11475568-11474748 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-831 |
| Cow position: | chr14:13580562-13581375 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 16-861 |
| Cow position: | chr14:8899011-8899862 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 16-868 |
| Cow position: | chr14:34669069-34668207 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 16-869 |
| Cow position: | chr14:32448681-32449553 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr14:1660183-1661041 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 16-870 |
| Cow position: | chr14:11152184-11151329 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 16-870 |
| Cow position: | chr14:12741323-12740464 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 16-870 |
| Cow position: | chr14:12802854-12802019 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 16-870 |
| Cow position: | chr14:19326538-19325674 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 16-870 |
| Cow position: | chr14:29045955-29045088 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr14:44690900-44691758 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr14:46122852-46123704 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 91 |
| Conread position: | 16-870 |
| Cow position: | chr14:50113089-50113955 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 17-309 |
| Cow position: | chr14:46506894-46506599 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 17-447 |
| Cow position: | chr14:30582396-30581966 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 17-477 |
| Cow position: | chr14:46638356-46638811 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 307 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 17-842 |
| Cow position: | chr14:13861792-13860969 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 17-850 |
| Cow position: | chr14:37225882-37226738 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 18-482 |
| Cow position: | chr14:46503416-46503882 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 145 |
| Conread position: | 24-870 |
| Cow position: | chr14:16917999-16917141 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 30-218 |
| Cow position: | chr14:33734444-33734253 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 101-613 |
| Cow position: | chr14:3210397-3210905 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 53 |
| Conread position: | 161-650 |
| Cow position: | chr14:31391172-31390693 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 55 |
| Conread position: | 173-727 |
| Cow position: | chr14:19313317-19312772 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 30 |
| Conread position: | 181-447 |
| Cow position: | chr14:38916199-38915946 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 194-481 |
| Cow position: | chr14:46389355-46389072 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 210, 92 |
| Conread position: | 267-643 |
| Cow position: | chr14:34634897-34634525 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 201, 14 |
| Conread position: | 363-844 |
| Cow position: | chr14:41445068-41445564 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 125, 379 |
| Conread position: | 363-870 |
| Cow position: | chr14:17689195-17689714 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 396-826 |
| Cow position: | chr14:13096570-13096996 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 109 |
| Conread position: | 456-870 |
| Cow position: | chr14:21047498-21047081 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 85 |
Show alignments to all cow chromosomes.