Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 2-442 |
| Cow position: | chr15:17804281-17803852 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 11-284 |
| Cow position: | chr15:2018848-2019123 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 11-350 |
| Cow position: | chr15:9002507-9002169 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 11-481 |
| Cow position: | chr15:53322845-53323310 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 312 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 11-482 |
| Cow position: | chr15:17216423-17215954 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 11-745 |
| Cow position: | chr15:22290376-22289634 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 469 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 11-870 |
| Cow position: | chr15:59376-60220 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 11-870 |
| Cow position: | chr15:13679126-13679972 (view UCSC Genome Browser custom track) |
| Alignm length: | 884 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 12-247 |
| Cow position: | chr15:52370575-52370337 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 12-501 |
| Cow position: | chr15:41321986-41321522 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 13-676 |
| Cow position: | chr15:13539134-13538487 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 89 |
| Conread position: | 16-239 |
| Cow position: | chr15:3753174-3753400 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 16-350 |
| Cow position: | chr15:314357-314021 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 16-377 |
| Cow position: | chr15:4814306-4814668 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 154 |
| Conread position: | 16-402 |
| Cow position: | chr15:53339938-53340325 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 16-405 |
| Cow position: | chr15:19736321-19735928 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 16-453 |
| Cow position: | chr15:7262338-7262777 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 16-477 |
| Cow position: | chr15:1784058-1784520 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 16-477 |
| Cow position: | chr15:32712929-32713392 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 16-487 |
| Cow position: | chr15:4948226-4948701 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-493 |
| Cow position: | chr15:5009913-5009433 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 16-503 |
| Cow position: | chr15:16190048-16189555 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-512 |
| Cow position: | chr15:24041987-24042485 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 16-559 |
| Cow position: | chr15:2645925-2645377 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-559 |
| Cow position: | chr15:6552041-6551494 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 16-573 |
| Cow position: | chr15:34191074-34190534 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 363 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 252, 51 |
| Conread position: | 16-595 |
| Cow position: | chr15:21804737-21805299 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 35 |
| Conread position: | 16-669 |
| Cow position: | chr15:7330037-7329392 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 410 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 66 |
| Conread position: | 16-670 |
| Cow position: | chr15:45706964-45707599 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 413 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 16-717 |
| Cow position: | chr15:5939941-5939231 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-717 |
| Cow position: | chr15:33123103-33123820 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 16-718 |
| Cow position: | chr15:2078368-2079067 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 16-718 |
| Cow position: | chr15:20412318-20413033 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 16-811 |
| Cow position: | chr15:24296915-24297724 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 16-837 |
| Cow position: | chr15:7236032-7236861 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 151 |
| Conread position: | 16-847 |
| Cow position: | chr15:1319172-1320000 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 531 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 16-850 |
| Cow position: | chr15:2900530-2899686 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-850 |
| Cow position: | chr15:6119143-6119956 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 16-850 |
| Cow position: | chr15:13429545-13430393 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-861 |
| Cow position: | chr15:18266038-18265181 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 16-868 |
| Cow position: | chr15:18228786-18229652 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-868 |
| Cow position: | chr15:25205284-25204422 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr15:4387476-4388336 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr15:4726925-4727803 (view UCSC Genome Browser custom track) |
| Alignm length: | 889 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 147 |
| Conread position: | 16-870 |
| Cow position: | chr15:7270067-7270927 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 16-870 |
| Cow position: | chr15:13389625-13388783 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 136 |
| Conread position: | 16-870 |
| Cow position: | chr15:14574580-14573714 (view UCSC Genome Browser custom track) |
| Alignm length: | 889 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 16-870 |
| Cow position: | chr15:14580430-14579556 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 160 |
| Conread position: | 16-870 |
| Cow position: | chr15:15345383-15344514 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr15:28488402-28487539 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 16-870 |
| Cow position: | chr15:35751576-35750706 (view UCSC Genome Browser custom track) |
| Alignm length: | 885 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 16-870 |
| Cow position: | chr15:36330737-36329871 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr15:38982381-38983249 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 16-870 |
| Cow position: | chr15:51219465-51220330 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 17-319 |
| Cow position: | chr15:22439490-22439787 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 257, 16 |
| Conread position: | 17-837 |
| Cow position: | chr15:32478918-32478107 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 504 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 151 |
| Conread position: | 18-363 |
| Cow position: | chr15:39447832-39447483 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 33-407 |
| Cow position: | chr15:9737163-9736792 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 38-478 |
| Cow position: | chr15:4638683-4639121 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 106-480 |
| Cow position: | chr15:29867813-29867464 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 111-847 |
| Cow position: | chr15:30727419-30726684 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 474 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 60 |
| Conread position: | 122-860 |
| Cow position: | chr15:20848772-20848044 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 37 |
| Conread position: | 144-853 |
| Cow position: | chr15:7309748-7310466 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 145-870 |
| Cow position: | chr15:2633853-2633120 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 102 |
| Conread position: | 154-870 |
| Cow position: | chr15:31363330-31364055 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 224 |
| Conread position: | 186-870 |
| Cow position: | chr15:3891462-3892154 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 185 |
| Conread position: | 203-870 |
| Cow position: | chr15:27747923-27748599 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 168 |
| Conread position: | 212-817 |
| Cow position: | chr15:28468353-28468967 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 237-610 |
| Cow position: | chr15:33656545-33656179 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 257-504 |
| Cow position: | chr15:43638815-43639057 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 301-850 |
| Cow position: | chr15:46552084-46551519 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 347-870 |
| Cow position: | chr15:313737-313211 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 395-769 |
| Cow position: | chr15:22129173-22129551 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 470-728 |
| Cow position: | chr15:30474473-30474218 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 27 |
Show alignments to all cow chromosomes.