Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               292
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               11-284
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               11-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               11-481
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               312
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               11-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 151
               

               Conread position:
               11-745
               

               Cow position:
               
               

               Alignm length:
               768
               

               Alignm identity:
               469
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 135
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               12-247
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               12-501
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               13-676
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               16-239
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-377
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               16-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               16-405
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               16-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 141
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               16-487
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-493
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-512
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               16-573
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               363
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               252, 51
               

               Conread position:
               16-595
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 35
               

               Conread position:
               16-669
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               410
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 66
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               413
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               16-717
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-717
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               16-718
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 125
               

               Conread position:
               16-718
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               16-811
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               16-837
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               16-847
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               531
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 99
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-861
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 147
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 155
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 119
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               886
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               17-319
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               257, 16
               

               Conread position:
               17-837
               

               Cow position:
               
               

               Alignm length:
               843
               

               Alignm identity:
               504
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 151
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 138
               

               Conread position:
               33-407
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               38-478
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               106-480
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               111-847
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               474
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               168, 60
               

               Conread position:
               122-860
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               144-853
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               145-870
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 102
               

               Conread position:
               154-870
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 224
               

               Conread position:
               186-870
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 185
               

               Conread position:
               203-870
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 168
               

               Conread position:
               212-817
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               237-610
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               257-504
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               301-850
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 68
               

               Conread position:
               347-870
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               322
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               395-769
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               470-728
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 27
               
Show alignments to all cow chromosomes.