Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               883
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               12-282
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               12-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               12-404
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               12-442
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               12-645
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               12-709
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               431
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               12-845
               

               Cow position:
               
               

               Alignm length:
               853
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               12-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               13-262
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               13-371
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 89
               

               Conread position:
               13-811
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               13-869
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               13-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 163
               

               Conread position:
               14-559
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               15-824
               

               Cow position:
               
               

               Alignm length:
               837
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 90
               

               Conread position:
               16-245
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               16-331
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               16-390
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-402
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               16-405
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-625
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 139
               

               Conread position:
               16-717
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               16-718
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-774
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               16-776
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               16-815
               

               Cow position:
               
               

               Alignm length:
               815
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               16-831
               

               Cow position:
               
               

               Alignm length:
               852
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               16-831
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               516
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               860
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               16-851
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 163
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               893
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               883
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               888
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               440, 135
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 165
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 135
               

               Conread position:
               18-820
               

               Cow position:
               
               

               Alignm length:
               829
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               19-528
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 107
               

               Conread position:
               21-868
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               29-870
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               35-870
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 124
               

               Conread position:
               73-620
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               106-683
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               137-870
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 17
               

               Conread position:
               148-853
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 72
               

               Conread position:
               172-870
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 149
               

               Conread position:
               173-724
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               199-869
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               415
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               190, 29
               

               Conread position:
               203-745
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 70
               

               Conread position:
               301-850
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               347
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 70
               

               Conread position:
               314-531
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               126, 56
               

               Conread position:
               334-508
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               345-830
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               306
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               362-870
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 95
               

               Conread position:
               400-870
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 90
               

               Conread position:
               412-776
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               502-869
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 39
               
Show alignments to all cow chromosomes.