Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 11-387 |
| Cow position: | chr18:23441665-23441299 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 11-478 |
| Cow position: | chr18:42516764-42517230 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 60, 93 |
| Conread position: | 12-869 |
| Cow position: | chr18:14422421-14423289 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 637 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 13-338 |
| Cow position: | chr18:46866761-46866421 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 13-493 |
| Cow position: | chr18:25353406-25353887 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 13-862 |
| Cow position: | chr18:43336851-43336002 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 15-478 |
| Cow position: | chr18:1046510-1046971 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 297 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 353 |
| Conread position: | 15-868 |
| Cow position: | chr18:33143818-33144633 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 542 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 16-267 |
| Cow position: | chr18:8646490-8646743 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 16-390 |
| Cow position: | chr18:47743654-47744030 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 16-401 |
| Cow position: | chr18:28766959-28767348 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 16-405 |
| Cow position: | chr18:14132546-14132945 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 16-447 |
| Cow position: | chr18:25941060-25941495 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 136 |
| Conread position: | 16-500 |
| Cow position: | chr18:19336735-19337226 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 344 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 16-645 |
| Cow position: | chr18:30762801-30762155 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-720 |
| Cow position: | chr18:37156588-37155887 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-849 |
| Cow position: | chr18:36510780-36511621 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-850 |
| Cow position: | chr18:32437945-32437097 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr18:37701329-37700470 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr18:604296-603440 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 16-870 |
| Cow position: | chr18:14418131-14419002 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-870 |
| Cow position: | chr18:22183363-22182513 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 16-870 |
| Cow position: | chr18:23702924-23702058 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 36 |
| Conread position: | 16-870 |
| Cow position: | chr18:25922548-25923410 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 144 |
| Conread position: | 16-870 |
| Cow position: | chr18:29864448-29863580 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr18:37490988-37491827 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 532 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 16-870 |
| Cow position: | chr18:40483167-40484020 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 142 |
| Conread position: | 16-870 |
| Cow position: | chr18:51460681-51459817 (view UCSC Genome Browser custom track) |
| Alignm length: | 884 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 16-870 |
| Cow position: | chr18:52654973-52655831 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 22-625 |
| Cow position: | chr18:37676705-37677288 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 387 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 22-870 |
| Cow position: | chr18:24713802-24712954 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 24-558 |
| Cow position: | chr18:19354534-19355065 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 24-870 |
| Cow position: | chr18:37508133-37508993 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 25-447 |
| Cow position: | chr18:32655858-32656282 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 29-870 |
| Cow position: | chr18:17960793-17959954 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 608 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 31-264 |
| Cow position: | chr18:16663709-16663479 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 74-870 |
| Cow position: | chr18:16092040-16092844 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 76-720 |
| Cow position: | chr18:22480736-22481366 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 93-850 |
| Cow position: | chr18:51344353-51345110 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 58 |
| Conread position: | 173-853 |
| Cow position: | chr18:44023817-44024479 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 33 |
| Conread position: | 211-417 |
| Cow position: | chr18:36846030-36846237 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 254-481 |
| Cow position: | chr18:38160459-38160233 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 291-503 |
| Cow position: | chr18:19474304-19474516 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 371-619 |
| Cow position: | chr18:36783845-36784103 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 156, 245 |
| Conread position: | 383-861 |
| Cow position: | chr18:20288352-20287873 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 64 |
| Conread position: | 462-665 |
| Cow position: | chr18:56453749-56453534 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 194 |
| Conread position: | 479-870 |
| Cow position: | chr18:19543904-19543526 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 38 |
Show alignments to all cow chromosomes.