Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 12-245 |
| Cow position: | chr19:3014977-3014739 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 147 |
| Conread position: | 12-402 |
| Cow position: | chr19:2271956-2271565 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 12-700 |
| Cow position: | chr19:1587081-1586397 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 432 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 12-790 |
| Cow position: | chr19:42582124-42581339 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 166 |
| Conread position: | 13-477 |
| Cow position: | chr19:43146834-43147302 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 146 |
| Conread position: | 13-613 |
| Cow position: | chr19:12700954-12701547 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 388 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 13-822 |
| Cow position: | chr19:26757576-26758340 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 16-372 |
| Cow position: | chr19:5899342-5898984 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-481 |
| Cow position: | chr19:39392675-39393143 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 16-494 |
| Cow position: | chr19:22511610-22511129 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-637 |
| Cow position: | chr19:29142236-29142870 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 16-657 |
| Cow position: | chr19:5248625-5247976 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 410 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 16-719 |
| Cow position: | chr19:39666388-39665708 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 159 |
| Conread position: | 16-810 |
| Cow position: | chr19:40885582-40884773 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 143 |
| Conread position: | 16-850 |
| Cow position: | chr19:7481770-7480925 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 114 |
| Conread position: | 16-850 |
| Cow position: | chr19:32718989-32719821 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 617 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 16-861 |
| Cow position: | chr19:20610495-20611355 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr19:16318446-16317581 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr19:39183376-39182510 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 16-870 |
| Cow position: | chr19:165952-165098 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 16-870 |
| Cow position: | chr19:4387761-4388613 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 139 |
| Conread position: | 16-870 |
| Cow position: | chr19:7490264-7491130 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr19:12775286-12776152 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 16-870 |
| Cow position: | chr19:20106889-20107768 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 16-870 |
| Cow position: | chr19:33875579-33876446 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 164 |
| Conread position: | 16-870 |
| Cow position: | chr19:33943735-33944597 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-870 |
| Cow position: | chr19:40850322-40849457 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 152 |
| Conread position: | 17-478 |
| Cow position: | chr19:28579510-28579071 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 439, 69 |
| Conread position: | 17-669 |
| Cow position: | chr19:257478-258141 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 427 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 17-827 |
| Cow position: | chr19:3089159-3088333 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 19-236 |
| Cow position: | chr19:40655682-40655907 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 83 |
| Conread position: | 22-501 |
| Cow position: | chr19:32498570-32498095 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 24-348 |
| Cow position: | chr19:343423-343744 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 24-353 |
| Cow position: | chr19:36418143-36418474 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 24-454 |
| Cow position: | chr19:891062-890636 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 72-853 |
| Cow position: | chr19:9116484-9115716 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 224-492 |
| Cow position: | chr19:28595761-28596018 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-767 |
| Cow position: | chr19:5766774-5767283 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 52 |
| Conread position: | 264-842 |
| Cow position: | chr19:25765799-25766371 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 116 |
| Conread position: | 276-662 |
| Cow position: | chr19:3402570-3402184 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 312-817 |
| Cow position: | chr19:18359836-18359323 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 338 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 349-870 |
| Cow position: | chr19:12553733-12553202 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 356-870 |
| Cow position: | chr19:55694201-55693699 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 396-867 |
| Cow position: | chr19:326862-327319 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 59 |
| Conread position: | 404-629 |
| Cow position: | chr19:35173886-35173652 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 427-843 |
| Cow position: | chr19:39640348-39640757 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 38 |
Show alignments to all cow chromosomes.