Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               6-315
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               6-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               11-263
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 157
               

               Conread position:
               11-342
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 158
               

               Conread position:
               11-454
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               11-773
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               474
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 157
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 5
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 149
               

               Conread position:
               12-478
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 150
               

               Conread position:
               12-531
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               13-373
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               13-563
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               349
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               177, 45
               

               Conread position:
               13-712
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               13-721
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               13-852
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               13-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               535
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               14-853
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 56
               

               Conread position:
               15-850
               

               Cow position:
               
               

               Alignm length:
               852
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 99
               

               Conread position:
               16-270
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               16-308
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-356
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               16-368
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-372
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-390
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               16-393
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-405
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 141
               

               Conread position:
               16-424
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 155
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               16-492
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               319
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               16-493
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-516
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 138
               

               Conread position:
               16-520
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               16-643
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-666
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               16-717
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               16-783
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               16-789
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               489
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               16-817
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               486
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               16-827
               

               Cow position:
               
               

               Alignm length:
               833
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 87
               

               Conread position:
               16-836
               

               Cow position:
               
               

               Alignm length:
               834
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               16-841
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 139
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 108
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               864
               

               Alignm identity:
               522
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               16-853
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 102
               

               Conread position:
               16-861
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-869
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               529
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 359
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 85
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 85
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 163
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 145
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               17-402
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               23-313
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               24-358
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               25-870
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               28-870
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               38-487
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               298
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               42-672
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               45-870
               

               Cow position:
               
               

               Alignm length:
               848
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               76-548
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               113-522
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               275, 50
               

               Conread position:
               154-870
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 217
               

               Conread position:
               154-870
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 226
               

               Conread position:
               158-831
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               167-870
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 204
               

               Conread position:
               187-637
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               374, 151
               

               Conread position:
               200-819
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 11
               

               Conread position:
               237-686
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               297-845
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               351
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               298-824
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               110, 73
               

               Conread position:
               358-645
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               451-868
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 89
               

               Conread position:
               475-831
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               486-870
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               598-853
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 112
               

               Conread position:
               613-870
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 25
               
Show alignments to all cow chromosomes.