Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-481
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               11-639
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               416
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               11-828
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               530
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 91
               

               Conread position:
               11-853
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               530
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 169
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               12-349
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 159
               

               Conread position:
               12-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 148
               

               Conread position:
               12-501
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 142
               

               Conread position:
               13-350
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               57, 146
               

               Conread position:
               13-351
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               13-478
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               13-559
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 147
               

               Conread position:
               13-825
               

               Cow position:
               
               

               Alignm length:
               846
               

               Alignm identity:
               516
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               15-559
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 154
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               16-341
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-373
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 98
               

               Conread position:
               16-444
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 155
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               16-717
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-776
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               16-788
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               502
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               16-809
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 98
               

               Conread position:
               16-849
               

               Cow position:
               
               

               Alignm length:
               857
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-852
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               887
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               19-559
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 133
               

               Conread position:
               21-350
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               48, 138
               

               Conread position:
               24-481
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               307
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               27-482
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               311
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               30-402
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               66-870
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 68
               

               Conread position:
               111-519
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               121, 48
               

               Conread position:
               168-521
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               288, 7
               

               Conread position:
               190-665
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 72
               

               Conread position:
               217-870
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 69
               

               Conread position:
               235-870
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 124
               

               Conread position:
               241-549
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               276, 54
               

               Conread position:
               248-512
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               254-850
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 117
               

               Conread position:
               264-870
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 128
               

               Conread position:
               302-870
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               314-845
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               343
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               333-853
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               345-827
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 24
               

               Conread position:
               349-850
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               441-769
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               472-870
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.