Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 11-296 |
| Cow position: | chr22:36573961-36573673 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 5 |
| Conread position: | 11-839 |
| Cow position: | chr22:15870856-15871689 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 524 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 11-869 |
| Cow position: | chr22:36128232-36127362 (view UCSC Genome Browser custom track) |
| Alignm length: | 898 |
| Alignm identity: | 554 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 12-387 |
| Cow position: | chr22:11806688-11806314 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 13-531 |
| Cow position: | chr22:95351-94832 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 57, 158 |
| Conread position: | 13-670 |
| Cow position: | chr22:11780903-11780242 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 421 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 137 |
| Conread position: | 13-820 |
| Cow position: | chr22:18604736-18603925 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 155 |
| Conread position: | 16-319 |
| Cow position: | chr22:2849530-2849224 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 16-335 |
| Cow position: | chr22:37291607-37291283 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-350 |
| Cow position: | chr22:44459728-44460070 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 147 |
| Conread position: | 16-387 |
| Cow position: | chr22:36271195-36271577 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 16-447 |
| Cow position: | chr22:10548710-10549142 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 159 |
| Conread position: | 16-450 |
| Cow position: | chr22:3272017-3271585 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 16-461 |
| Cow position: | chr22:6500854-6500413 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 300 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 16-465 |
| Cow position: | chr22:5889116-5888662 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 16-465 |
| Cow position: | chr22:44517095-44516646 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 16-474 |
| Cow position: | chr22:38551921-38552372 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 16-481 |
| Cow position: | chr22:6333880-6334343 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 16-481 |
| Cow position: | chr22:44398505-44398968 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-481 |
| Cow position: | chr22:44936006-44936475 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 163 |
| Conread position: | 16-487 |
| Cow position: | chr22:39467445-39466974 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-493 |
| Cow position: | chr22:32205133-32205605 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 16-559 |
| Cow position: | chr22:8132718-8132177 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-618 |
| Cow position: | chr22:18614350-18614953 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-623 |
| Cow position: | chr22:44367412-44366791 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 16-683 |
| Cow position: | chr22:19141621-19140944 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 155 |
| Conread position: | 16-705 |
| Cow position: | chr22:18029338-18030041 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-717 |
| Cow position: | chr22:1518964-1518249 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 16-718 |
| Cow position: | chr22:41847483-41846769 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 16-783 |
| Cow position: | chr22:11802985-11802206 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-815 |
| Cow position: | chr22:29853923-29854731 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-831 |
| Cow position: | chr22:40372475-40373293 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 16-868 |
| Cow position: | chr22:20238770-20237904 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 144 |
| Conread position: | 16-870 |
| Cow position: | chr22:558638-557772 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:980354-981221 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:3276285-3275427 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:11608707-11609575 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:13208479-13209316 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 152 |
| Conread position: | 16-870 |
| Cow position: | chr22:15309888-15309033 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:17326415-17325552 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 16-870 |
| Cow position: | chr22:28784182-28785050 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:30676644-30675797 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr22:34170405-34171272 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:35669601-35668738 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 16-870 |
| Cow position: | chr22:36185687-36186562 (view UCSC Genome Browser custom track) |
| Alignm length: | 885 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 16-870 |
| Cow position: | chr22:36859482-36858606 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-870 |
| Cow position: | chr22:37269163-37270026 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 16-870 |
| Cow position: | chr22:42993240-42994103 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 17-369 |
| Cow position: | chr22:35827202-35826840 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 28-870 |
| Cow position: | chr22:31314617-31315474 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 148 |
| Conread position: | 30-443 |
| Cow position: | chr22:15494631-15495058 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 112-870 |
| Cow position: | chr22:3434777-3434033 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 59 |
| Conread position: | 122-870 |
| Cow position: | chr22:31332703-31331942 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 29 |
| Conread position: | 153-870 |
| Cow position: | chr22:19601596-19600871 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 369 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 160, 219 |
| Conread position: | 155-830 |
| Cow position: | chr22:16439827-16440476 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 235-429 |
| Cow position: | chr22:19019408-19019216 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 422-870 |
| Cow position: | chr22:26455316-26454857 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 558-870 |
| Cow position: | chr22:13866133-13865817 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 211 |
Show alignments to all cow chromosomes.