Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 9-670 |
| Cow position: | chr24:24801868-24801194 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 11-319 |
| Cow position: | chr24:33029331-33029635 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 11-388 |
| Cow position: | chr24:4413408-4413033 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 11-720 |
| Cow position: | chr24:42583619-42582905 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 450 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 11-870 |
| Cow position: | chr24:16082343-16081470 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 12-870 |
| Cow position: | chr24:19184314-19185171 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 13-519 |
| Cow position: | chr24:22321883-22322373 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 13-868 |
| Cow position: | chr24:40550772-40551639 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 146 |
| Conread position: | 14-318 |
| Cow position: | chr24:6272471-6272162 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 15-853 |
| Cow position: | chr24:25419951-25419100 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 558 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 16-255 |
| Cow position: | chr24:5887114-5886870 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 16-257 |
| Cow position: | chr24:18212515-18212761 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-297 |
| Cow position: | chr24:6962595-6962309 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-350 |
| Cow position: | chr24:17454982-17454643 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-432 |
| Cow position: | chr24:22973220-22973637 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 16-449 |
| Cow position: | chr24:6472238-6472665 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 16-481 |
| Cow position: | chr24:11691848-11691382 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 168 |
| Conread position: | 16-481 |
| Cow position: | chr24:19835556-19836025 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-498 |
| Cow position: | chr24:11150974-11150490 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-670 |
| Cow position: | chr24:16560155-16559486 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 163 |
| Conread position: | 16-686 |
| Cow position: | chr24:6199257-6199943 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 16-831 |
| Cow position: | chr24:14174580-14173784 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 506 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 16-837 |
| Cow position: | chr24:18867793-18866964 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 16-850 |
| Cow position: | chr24:6439901-6440749 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-850 |
| Cow position: | chr24:12333573-12332711 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-868 |
| Cow position: | chr24:208852-207990 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 16-868 |
| Cow position: | chr24:6021926-6021064 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 16-870 |
| Cow position: | chr24:146454-145587 (view UCSC Genome Browser custom track) |
| Alignm length: | 888 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 16-870 |
| Cow position: | chr24:6411629-6412494 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 16-870 |
| Cow position: | chr24:13234388-13235248 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-870 |
| Cow position: | chr24:19884442-19885307 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr24:40468256-40467400 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 16-870 |
| Cow position: | chr24:41004644-41005495 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 17-362 |
| Cow position: | chr24:14382465-14382111 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 17-870 |
| Cow position: | chr24:14335019-14335869 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 20-251 |
| Cow position: | chr24:8755077-8755309 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 24-372 |
| Cow position: | chr24:29085666-29086014 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 31-263 |
| Cow position: | chr24:16299909-16299674 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 76-643 |
| Cow position: | chr24:6696381-6696917 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 387 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 447, 33 |
| Conread position: | 77-670 |
| Cow position: | chr24:20285126-20284528 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 238-870 |
| Cow position: | chr24:23093668-23093032 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 142 |
| Conread position: | 238-870 |
| Cow position: | chr24:23096406-23095770 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 142 |
| Conread position: | 256-522 |
| Cow position: | chr24:24735317-24735062 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 232, 54 |
| Conread position: | 280-839 |
| Cow position: | chr24:27586198-27586754 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 315-718 |
| Cow position: | chr24:12466696-12467104 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 202, 12 |
| Conread position: | 440-844 |
| Cow position: | chr24:3328488-3328086 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 451-869 |
| Cow position: | chr24:20122440-20122026 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 161 |
| Conread position: | 457-783 |
| Cow position: | chr24:10591154-10591489 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 19 |
Show alignments to all cow chromosomes.