Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 11-387 |
| Cow position: | chr28:30921173-30920813 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 12-481 |
| Cow position: | chr28:2086572-2087035 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 12-669 |
| Cow position: | chr28:1385332-1384676 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 15-465 |
| Cow position: | chr28:12152463-12152916 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 144 |
| Conread position: | 15-524 |
| Cow position: | chr28:918467-917941 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 16-305 |
| Cow position: | chr28:22259039-22258747 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 16-324 |
| Cow position: | chr28:1460210-1460523 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-339 |
| Cow position: | chr28:34730036-34730364 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-350 |
| Cow position: | chr28:5568264-5568591 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 16-366 |
| Cow position: | chr28:30805875-30806232 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 16-369 |
| Cow position: | chr28:15674421-15674774 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 16-405 |
| Cow position: | chr28:26424150-26423767 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 16-447 |
| Cow position: | chr28:30959720-30960155 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 16-481 |
| Cow position: | chr28:3190137-3189669 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 16-481 |
| Cow position: | chr28:17665213-17664752 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 16-503 |
| Cow position: | chr28:5635943-5636424 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 332 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 16-647 |
| Cow position: | chr28:2364087-2363457 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 16-656 |
| Cow position: | chr28:21378641-21379294 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 414 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 152 |
| Conread position: | 16-735 |
| Cow position: | chr28:23311201-23310476 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-781 |
| Cow position: | chr28:8718855-8718092 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 16-844 |
| Cow position: | chr28:6536690-6535852 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 16-868 |
| Cow position: | chr28:1955472-1956339 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 16-868 |
| Cow position: | chr28:5210226-5211090 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-868 |
| Cow position: | chr28:10301946-10302809 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-868 |
| Cow position: | chr28:22041288-22040440 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-868 |
| Cow position: | chr28:28927937-28928804 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr28:34582025-34582892 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 16-870 |
| Cow position: | chr28:784777-785637 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 16-870 |
| Cow position: | chr28:1165783-1164920 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 16-870 |
| Cow position: | chr28:1215726-1214860 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr28:1506977-1507846 (view UCSC Genome Browser custom track) |
| Alignm length: | 887 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 64 |
| Conread position: | 16-870 |
| Cow position: | chr28:5749587-5748736 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 16-870 |
| Cow position: | chr28:5939596-5940456 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 16-870 |
| Cow position: | chr28:7335085-7335953 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 16-870 |
| Cow position: | chr28:7828603-7829477 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 16-870 |
| Cow position: | chr28:8381151-8382017 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr28:9180976-9181840 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 16-870 |
| Cow position: | chr28:12408108-12407244 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr28:15918414-15917555 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 16-870 |
| Cow position: | chr28:17390516-17391385 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-870 |
| Cow position: | chr28:24884960-24885831 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 157 |
| Conread position: | 16-870 |
| Cow position: | chr28:29822307-29823156 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 61 |
| Conread position: | 16-870 |
| Cow position: | chr28:33254424-33255291 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-870 |
| Cow position: | chr28:34596362-34597214 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 70 |
| Conread position: | 18-830 |
| Cow position: | chr28:31849818-31848998 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 21-637 |
| Cow position: | chr28:7004116-7004746 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 21-718 |
| Cow position: | chr28:15685523-15686231 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 26-869 |
| Cow position: | chr28:9714472-9713626 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 39-870 |
| Cow position: | chr28:33638695-33639540 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 119 |
| Conread position: | 74-870 |
| Cow position: | chr28:30534895-30534090 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 98-870 |
| Cow position: | chr28:15033889-15033108 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 56 |
| Conread position: | 111-870 |
| Cow position: | chr28:30097082-30097848 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 40 |
| Conread position: | 122-870 |
| Cow position: | chr28:29037430-29036682 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 187-817 |
| Cow position: | chr28:9239496-9238856 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 190-747 |
| Cow position: | chr28:29841346-29840807 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 370 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 194-493 |
| Cow position: | chr28:691745-691448 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 195-596 |
| Cow position: | chr28:590599-590210 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 328, 79 |
| Conread position: | 195-734 |
| Cow position: | chr28:34420977-34421513 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 40 |
| Conread position: | 274-870 |
| Cow position: | chr28:25562794-25563378 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 377 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 345-870 |
| Cow position: | chr28:28358342-28357813 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 394-868 |
| Cow position: | chr28:7215398-7214948 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 403-762 |
| Cow position: | chr28:15094657-15094296 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 427-673 |
| Cow position: | chr28:34096217-34095971 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 36 |
Show alignments to all cow chromosomes.