Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 11-293 |
| Cow position: | chr4:28150190-28150481 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 148 |
| Conread position: | 11-447 |
| Cow position: | chr4:67467787-67468209 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 148 |
| Conread position: | 11-631 |
| Cow position: | chr4:27874560-27873928 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 270 |
| Conread position: | 11-840 |
| Cow position: | chr4:29032778-29033588 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 97 |
| Conread position: | 12-736 |
| Cow position: | chr4:38960896-38961623 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 467 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 12-837 |
| Cow position: | chr4:23890560-23889732 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 12-850 |
| Cow position: | chr4:67650285-67649412 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 13-501 |
| Cow position: | chr4:42969299-42968814 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 324 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 13-521 |
| Cow position: | chr4:76939-76425 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 13-797 |
| Cow position: | chr4:47639038-47639796 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 91 |
| Conread position: | 13-853 |
| Cow position: | chr4:20890398-20889592 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 538 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 16-284 |
| Cow position: | chr4:15460467-15460194 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 16-287 |
| Cow position: | chr4:59957570-59957317 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 83 |
| Conread position: | 16-336 |
| Cow position: | chr4:60262380-60262061 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-350 |
| Cow position: | chr4:13495129-13495455 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 153 |
| Conread position: | 16-363 |
| Cow position: | chr4:12239442-12239096 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 16-368 |
| Cow position: | chr4:17092072-17091715 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-389 |
| Cow position: | chr4:32394024-32394394 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 16-389 |
| Cow position: | chr4:34222535-34222908 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 16-390 |
| Cow position: | chr4:30473011-30473384 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-428 |
| Cow position: | chr4:31563423-31563011 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-432 |
| Cow position: | chr4:44779428-44779017 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-442 |
| Cow position: | chr4:963538-963111 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 16-461 |
| Cow position: | chr4:19263113-19263556 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 16-478 |
| Cow position: | chr4:9798444-9797984 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 311 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-492 |
| Cow position: | chr4:10883335-10883812 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-503 |
| Cow position: | chr4:15459613-15459120 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 16-559 |
| Cow position: | chr4:17924163-17923616 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 16-568 |
| Cow position: | chr4:51859277-51859834 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-702 |
| Cow position: | chr4:44727373-44728076 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 16-724 |
| Cow position: | chr4:28175285-28174575 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 159 |
| Conread position: | 16-783 |
| Cow position: | chr4:16061072-16061854 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 16-785 |
| Cow position: | chr4:6614336-6613577 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 16-830 |
| Cow position: | chr4:9484013-9483228 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 16-831 |
| Cow position: | chr4:38931157-38931978 (view UCSC Genome Browser custom track) |
| Alignm length: | 848 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 16-837 |
| Cow position: | chr4:37949073-37948277 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 16-850 |
| Cow position: | chr4:48028651-48029502 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 16-850 |
| Cow position: | chr4:58622734-58621885 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-860 |
| Cow position: | chr4:18337155-18336307 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr4:40216634-40217496 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 16-868 |
| Cow position: | chr4:41474048-41473172 (view UCSC Genome Browser custom track) |
| Alignm length: | 888 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-868 |
| Cow position: | chr4:41956562-41957420 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 16-868 |
| Cow position: | chr4:41960698-41961555 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 16-869 |
| Cow position: | chr4:1048466-1047592 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 16-870 |
| Cow position: | chr4:357686-358545 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 16-870 |
| Cow position: | chr4:2350925-2350056 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:3068735-3069582 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:3448584-3449456 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:4417848-4418709 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 16-870 |
| Cow position: | chr4:6488569-6487707 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:6864434-6863571 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 102 |
| Conread position: | 16-870 |
| Cow position: | chr4:16362000-16362862 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:17034705-17033841 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 16-870 |
| Cow position: | chr4:20605447-20606288 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 16-870 |
| Cow position: | chr4:25597688-25596825 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:33071043-33070181 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 16-870 |
| Cow position: | chr4:33495354-33496221 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:36898166-36899037 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 16-870 |
| Cow position: | chr4:43317852-43316989 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr4:61241079-61241943 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 17-390 |
| Cow position: | chr4:68837196-68836823 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 152 |
| Conread position: | 17-870 |
| Cow position: | chr4:3356167-3355301 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 17-870 |
| Cow position: | chr4:16640407-16641272 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 19-839 |
| Cow position: | chr4:60626698-60625893 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 523 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 135 |
| Conread position: | 23-387 |
| Cow position: | chr4:14794239-14794596 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 148 |
| Conread position: | 24-257 |
| Cow position: | chr4:14387622-14387860 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 24-670 |
| Cow position: | chr4:27335738-27336407 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 29-870 |
| Cow position: | chr4:67382107-67382947 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 58 |
| Conread position: | 59-576 |
| Cow position: | chr4:14200026-14200528 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 32 |
| Conread position: | 60-826 |
| Cow position: | chr4:5754722-5755459 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 485 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 154-870 |
| Cow position: | chr4:23305393-23304681 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 132 |
| Conread position: | 187-479 |
| Cow position: | chr4:39933346-39933624 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 198-721 |
| Cow position: | chr4:47487125-47487641 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 188, 88 |
| Conread position: | 204-817 |
| Cow position: | chr4:31849771-31850385 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 205-522 |
| Cow position: | chr4:43986689-43986998 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 232-756 |
| Cow position: | chr4:66636273-66635758 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 237-858 |
| Cow position: | chr4:25348432-25349045 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 314-823 |
| Cow position: | chr4:54195354-54195852 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 363-849 |
| Cow position: | chr4:13498338-13498834 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 380-870 |
| Cow position: | chr4:33199214-33198735 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 396-824 |
| Cow position: | chr4:44381396-44380978 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 400-747 |
| Cow position: | chr4:1308422-1308780 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 92 |
| Conread position: | 441-841 |
| Cow position: | chr4:43621232-43621631 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 249 |
Show alignments to all cow chromosomes.