Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               11-447
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               11-631
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 270
               

               Conread position:
               11-840
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               12-736
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               467
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               12-837
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               12-850
               

               Cow position:
               
               

               Alignm length:
               886
               

               Alignm identity:
               611
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               324
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               13-521
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 88
               

               Conread position:
               13-797
               

               Cow position:
               
               

               Alignm length:
               804
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               13-853
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               538
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               16-287
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               16-336
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 153
               

               Conread position:
               16-363
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               16-368
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-389
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               16-389
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               16-390
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-428
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-432
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-442
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 150
               

               Conread position:
               16-461
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               311
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-492
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               16-568
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-702
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-724
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               16-783
               

               Cow position:
               
               

               Alignm length:
               791
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               16-785
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               16-830
               

               Cow position:
               
               

               Alignm length:
               823
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               16-831
               

               Cow position:
               
               

               Alignm length:
               848
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               16-837
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 148
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               857
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-860
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               888
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 160
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 160
               

               Conread position:
               16-869
               

               Cow position:
               
               

               Alignm length:
               886
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               17-390
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               17-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 143
               

               Conread position:
               19-839
               

               Cow position:
               
               

               Alignm length:
               846
               

               Alignm identity:
               523
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 135
               

               Conread position:
               23-387
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               24-257
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 135
               

               Conread position:
               24-670
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               29-870
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 58
               

               Conread position:
               59-576
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               501, 32
               

               Conread position:
               60-826
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               485
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               154-870
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 132
               

               Conread position:
               187-479
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               198-721
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               188, 88
               

               Conread position:
               204-817
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               205-522
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 94
               

               Conread position:
               232-756
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               237-858
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               314-823
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               363-849
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               93, 101
               

               Conread position:
               380-870
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               336
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               396-824
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               400-747
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 92
               

               Conread position:
               441-841
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 249
               
Show alignments to all cow chromosomes.