Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 128
               

               Conread position:
               11-481
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               318
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 143
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               888
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               12-444
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               12-476
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               12-479
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               12-501
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               12-694
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               12-773
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 164
               

               Conread position:
               13-431
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               15-322
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 138
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-350
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               16-363
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               16-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-368
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-372
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-398
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 106
               

               Conread position:
               16-432
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-466
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 159
               

               Conread position:
               16-475
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-476
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               322
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               16-605
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-612
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               16-809
               

               Cow position:
               
               

               Alignm length:
               814
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 145
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               853
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               16-860
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               16-861
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 55
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               900
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 160
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               17-478
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               17-772
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               18-402
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               21-549
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 86
               

               Conread position:
               21-673
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               417
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               23-284
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               24-828
               

               Cow position:
               
               

               Alignm length:
               823
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               24-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 155
               

               Conread position:
               30-270
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               72-503
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               74-870
               

               Cow position:
               
               

               Alignm length:
               814
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               76-729
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               105-831
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               108-870
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 55
               

               Conread position:
               134-501
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 15
               

               Conread position:
               143-651
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               337
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               145-868
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               154-832
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 217
               

               Conread position:
               154-870
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 55
               

               Conread position:
               168-644
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               207-870
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 149
               

               Conread position:
               269-529
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 48
               

               Conread position:
               277-557
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               169, 50
               

               Conread position:
               278-868
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 30
               

               Conread position:
               294-837
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               347
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 81
               

               Conread position:
               327-853
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               340
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 87
               

               Conread position:
               339-870
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               354-820
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               301
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               374-734
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               400-736
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               423-647
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 72
               
Show alignments to all cow chromosomes.