Cow genome map
Conread name: | LyN1-MLN01A100079 |
Conread position: | 5-870 |
Cow position: | chr6:16767815-16766938 (view UCSC Genome Browser custom track) |
Alignm length: | 890 |
Alignm identity: | 569 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 101 |
Conread position: | 11-724 |
Cow position: | chr6:66746393-66747132 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 472 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 60, 81 |
Conread position: | 11-824 |
Cow position: | chr6:67266284-67267122 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 81 |
Conread position: | 11-869 |
Cow position: | chr6:7941744-7940892 (view UCSC Genome Browser custom track) |
Alignm length: | 885 |
Alignm identity: | 624 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 96 |
Conread position: | 12-474 |
Cow position: | chr6:1107201-1106739 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 307 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 10, 149 |
Conread position: | 12-870 |
Cow position: | chr6:11723167-11722296 (view UCSC Genome Browser custom track) |
Alignm length: | 882 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 87 |
Conread position: | 13-519 |
Cow position: | chr6:64813984-64813491 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 94 |
Conread position: | 13-837 |
Cow position: | chr6:40317612-40318456 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 533 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 147 |
Conread position: | 13-844 |
Cow position: | chr6:37386612-37387454 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 150 |
Conread position: | 16-260 |
Cow position: | chr6:66388802-66388553 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 171 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 143 |
Conread position: | 16-270 |
Cow position: | chr6:31913653-31913912 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 143 |
Conread position: | 16-284 |
Cow position: | chr6:55785674-55785947 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-325 |
Cow position: | chr6:32632853-32633167 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-338 |
Cow position: | chr6:21890288-21890610 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 220 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-339 |
Cow position: | chr6:46479162-46479490 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 227 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-386 |
Cow position: | chr6:15895760-15895389 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 254 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 16-397 |
Cow position: | chr6:27171617-27171990 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 227 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-402 |
Cow position: | chr6:59618119-59618501 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 263 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 51, 155 |
Conread position: | 16-405 |
Cow position: | chr6:41229478-41229868 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-434 |
Cow position: | chr6:65843645-65844076 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 290 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 53, 155 |
Conread position: | 16-477 |
Cow position: | chr6:33809670-33810135 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 137 |
Conread position: | 16-481 |
Cow position: | chr6:704251-704717 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 35 |
Conread position: | 16-481 |
Cow position: | chr6:17048348-17048808 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 98 |
Conread position: | 16-481 |
Cow position: | chr6:51091394-51091866 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-486 |
Cow position: | chr6:1408617-1408143 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 144 |
Conread position: | 16-487 |
Cow position: | chr6:31587223-31586755 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 16-493 |
Cow position: | chr6:1820590-1820114 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 155 |
Conread position: | 16-493 |
Cow position: | chr6:30272858-30272375 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-493 |
Cow position: | chr6:44148512-44148038 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 55, 119 |
Conread position: | 16-531 |
Cow position: | chr6:18464229-18463728 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 26 |
Conread position: | 16-618 |
Cow position: | chr6:2556679-2557296 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 142 |
Conread position: | 16-670 |
Cow position: | chr6:50486767-50486094 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 146 |
Conread position: | 16-670 |
Cow position: | chr6:65849874-65849210 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 430 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 55, 76 |
Conread position: | 16-679 |
Cow position: | chr6:16982765-16982086 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 163 |
Conread position: | 16-718 |
Cow position: | chr6:25216336-25217047 (view UCSC Genome Browser custom track) |
Alignm length: | 727 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-810 |
Cow position: | chr6:33465005-33465802 (view UCSC Genome Browser custom track) |
Alignm length: | 819 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 138 |
Conread position: | 16-819 |
Cow position: | chr6:18913445-18912626 (view UCSC Genome Browser custom track) |
Alignm length: | 828 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 16-820 |
Cow position: | chr6:51716577-51717395 (view UCSC Genome Browser custom track) |
Alignm length: | 830 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 98 |
Conread position: | 16-827 |
Cow position: | chr6:60402768-60401951 (view UCSC Genome Browser custom track) |
Alignm length: | 846 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 102 |
Conread position: | 16-844 |
Cow position: | chr6:35874678-35873838 (view UCSC Genome Browser custom track) |
Alignm length: | 848 |
Alignm identity: | 537 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-850 |
Cow position: | chr6:47041154-47040330 (view UCSC Genome Browser custom track) |
Alignm length: | 858 |
Alignm identity: | 537 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 111 |
Conread position: | 16-868 |
Cow position: | chr6:12664283-12663418 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 91 |
Conread position: | 16-868 |
Cow position: | chr6:19104875-19104011 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 138 |
Conread position: | 16-868 |
Cow position: | chr6:20352059-20351192 (view UCSC Genome Browser custom track) |
Alignm length: | 876 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-868 |
Cow position: | chr6:28489535-28488671 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 123 |
Conread position: | 16-869 |
Cow position: | chr6:64718354-64719216 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 554 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 155 |
Conread position: | 16-870 |
Cow position: | chr6:183504-182641 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-870 |
Cow position: | chr6:3151266-3152117 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 143 |
Conread position: | 16-870 |
Cow position: | chr6:3486364-3485499 (view UCSC Genome Browser custom track) |
Alignm length: | 876 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 143 |
Conread position: | 16-870 |
Cow position: | chr6:4509615-4510423 (view UCSC Genome Browser custom track) |
Alignm length: | 865 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 66 |
Conread position: | 16-870 |
Cow position: | chr6:5947747-5946877 (view UCSC Genome Browser custom track) |
Alignm length: | 885 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 78 |
Conread position: | 16-870 |
Cow position: | chr6:7139302-7138441 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 86 |
Conread position: | 16-870 |
Cow position: | chr6:13309348-13308486 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-870 |
Cow position: | chr6:15139135-15138267 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-870 |
Cow position: | chr6:17596257-17595386 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 554 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 161 |
Conread position: | 16-870 |
Cow position: | chr6:18752138-18751291 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 606 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 10 |
Conread position: | 16-870 |
Cow position: | chr6:25791660-25790800 (view UCSC Genome Browser custom track) |
Alignm length: | 881 |
Alignm identity: | 569 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-870 |
Cow position: | chr6:27474465-27475311 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 70 |
Conread position: | 16-870 |
Cow position: | chr6:28134968-28135833 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 143 |
Conread position: | 16-870 |
Cow position: | chr6:38874624-38873759 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 566 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 144 |
Conread position: | 16-870 |
Cow position: | chr6:39332495-39331632 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 564 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 144 |
Conread position: | 16-870 |
Cow position: | chr6:39911367-39912224 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 562 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 74 |
Conread position: | 16-870 |
Cow position: | chr6:40974217-40975085 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 142 |
Conread position: | 16-870 |
Cow position: | chr6:43619769-43620630 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 16-870 |
Cow position: | chr6:44018795-44017928 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-870 |
Cow position: | chr6:51732115-51732981 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 143 |
Conread position: | 16-870 |
Cow position: | chr6:55237724-55238595 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 154 |
Conread position: | 17-351 |
Cow position: | chr6:14081586-14081929 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 229 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 51, 145 |
Conread position: | 17-837 |
Cow position: | chr6:11870896-11870065 (view UCSC Genome Browser custom track) |
Alignm length: | 847 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 137 |
Conread position: | 18-776 |
Cow position: | chr6:38273616-38274376 (view UCSC Genome Browser custom track) |
Alignm length: | 784 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 83 |
Conread position: | 21-870 |
Cow position: | chr6:1535749-1536604 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 47 |
Conread position: | 24-861 |
Cow position: | chr6:7160857-7161673 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 77 |
Conread position: | 24-870 |
Cow position: | chr6:3887468-3886607 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 561 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 134 |
Conread position: | 25-239 |
Cow position: | chr6:40128496-40128715 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 101 |
Conread position: | 29-870 |
Cow position: | chr6:49527-48673 (view UCSC Genome Browser custom track) |
Alignm length: | 865 |
Alignm identity: | 550 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 130 |
Conread position: | 30-620 |
Cow position: | chr6:6094283-6094880 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 129 |
Conread position: | 46-673 |
Cow position: | chr6:6122229-6121605 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 408 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 19, 111 |
Conread position: | 73-776 |
Cow position: | chr6:50655070-50655777 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 22 |
Conread position: | 80-870 |
Cow position: | chr6:36530395-36531180 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 377, 11 |
Conread position: | 82-870 |
Cow position: | chr6:6438924-6439708 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 12 |
Conread position: | 87-870 |
Cow position: | chr6:24241403-24242190 (view UCSC Genome Browser custom track) |
Alignm length: | 798 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 369, 12 |
Conread position: | 172-870 |
Cow position: | chr6:916236-916942 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 199 |
Conread position: | 181-850 |
Cow position: | chr6:21833437-21832779 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 35 |
Conread position: | 226-519 |
Cow position: | chr6:15153474-15153761 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 197 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 161, 46 |
Conread position: | 235-868 |
Cow position: | chr6:60378417-60379060 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 136 |
Conread position: | 327-870 |
Cow position: | chr6:35723758-35724294 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 339 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 58, 137 |
Conread position: | 328-850 |
Cow position: | chr6:66561877-66562406 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 338 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 128, 43 |
Show alignments to all cow chromosomes.