Cow genome map

Conread name: LyN1-MLN01A100079

Conread position: 11-404
Cow position: chr7:37068128-37068520 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 100

Conread position: 11-404
Cow position: chr7:59139797-59140187 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 81

Conread position: 11-853
Cow position: chr7:24708706-24707859 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 93

Conread position: 11-869
Cow position: chr7:20797329-20796468 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 148

Conread position: 11-870
Cow position: chr7:7260641-7261513 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 148

Conread position: 12-372
Cow position: chr7:4159023-4158663 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 11, 72

Conread position: 12-387
Cow position: chr7:1816484-1816115 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 72

Conread position: 12-503
Cow position: chr7:21244209-21243718 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 92

Conread position: 12-870
Cow position: chr7:13531783-13530915 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 102

Conread position: 13-213
Cow position: chr7:67026083-67025877 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 139

Conread position: 13-350
Cow position: chr7:901997-901656 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 158

Conread position: 13-362
Cow position: chr7:21878546-21878198 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 89

Conread position: 13-377
Cow position: chr7:55600-55956 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 91

Conread position: 13-813
Cow position: chr7:8073-8877 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 10

Conread position: 16-298
Cow position: chr7:18425908-18425629 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 100

Conread position: 16-299
Cow position: chr7:35758970-35759258 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 143

Conread position: 16-318
Cow position: chr7:20534094-20534398 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 125

Conread position: 16-319
Cow position: chr7:527077-527381 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 139

Conread position: 16-355
Cow position: chr7:20825413-20825743 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 149

Conread position: 16-372
Cow position: chr7:3127467-3127825 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 152

Conread position: 16-372
Cow position: chr7:47974179-47973824 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 9

Conread position: 16-372
Cow position: chr7:52764414-52764771 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 160

Conread position: 16-387
Cow position: chr7:63925757-63925380 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 6

Conread position: 16-401
Cow position: chr7:1368557-1368168 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 16-404
Cow position: chr7:45652740-45653124 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 82

Conread position: 16-446
Cow position: chr7:3807025-3807450 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 284
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 126

Conread position: 16-461
Cow position: chr7:61833843-61833390 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 303
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 116

Conread position: 16-476
Cow position: chr7:27458612-27458146 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 16-481
Cow position: chr7:33403757-33403289 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 16-481
Cow position: chr7:42303328-42302869 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 312
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 155

Conread position: 16-486
Cow position: chr7:20061601-20062071 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-487
Cow position: chr7:34817773-34818246 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 143

Conread position: 16-504
Cow position: chr7:64247473-64246982 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 326
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 138

Conread position: 16-555
Cow position: chr7:20557906-20558450 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 138

Conread position: 16-624
Cow position: chr7:58643426-58642817 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 402
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 6, 147

Conread position: 16-669
Cow position: chr7:34414931-34414264 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-669
Cow position: chr7:55040357-55039687 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 144

Conread position: 16-783
Cow position: chr7:20151590-20150812 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 16-810
Cow position: chr7:546985-547769 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 16-831
Cow position: chr7:30117098-30116291 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 518
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 77

Conread position: 16-837
Cow position: chr7:34488043-34488864 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 16-850
Cow position: chr7:5260807-5259964 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 13

Conread position: 16-850
Cow position: chr7:25441906-25442746 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 138

Conread position: 16-850
Cow position: chr7:61578004-61577156 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 143

Conread position: 16-852
Cow position: chr7:14213258-14212447 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 514
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 387, 70

Conread position: 16-863
Cow position: chr7:21232881-21232035 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 16-863
Cow position: chr7:51839342-51840185 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 16-868
Cow position: chr7:13787-12923 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 16-868
Cow position: chr7:6627251-6626385 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 16-868
Cow position: chr7:10429297-10428431 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 140

Conread position: 16-868
Cow position: chr7:11462006-11461148 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 16-868
Cow position: chr7:37164991-37165851 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 16-869
Cow position: chr7:18935538-18934695 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 16-870
Cow position: chr7:112736-113607 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 91

Conread position: 16-870
Cow position: chr7:444136-443269 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 16-870
Cow position: chr7:8142846-8141982 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr7:20433949-20434828 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 16-870
Cow position: chr7:24806360-24805502 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr7:26928050-26927185 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 86

Conread position: 16-870
Cow position: chr7:30304961-30305811 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 520
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 111

Conread position: 16-870
Cow position: chr7:34151069-34151932 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr7:46748112-46748978 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 145

Conread position: 16-870
Cow position: chr7:60728327-60727465 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 16-870
Cow position: chr7:64354144-64355006 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 143

Conread position: 17-387
Cow position: chr7:33071849-33071477 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 151

Conread position: 17-870
Cow position: chr7:11421453-11420590 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 141

Conread position: 18-852
Cow position: chr7:43280011-43280857 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 19-853
Cow position: chr7:59085099-59085901 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 55

Conread position: 21-870
Cow position: chr7:59773443-59774303 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 138

Conread position: 24-850
Cow position: chr7:3298540-3297708 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 29-870
Cow position: chr7:195763-194913 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 30-341
Cow position: chr7:34074081-34074397 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 71

Conread position: 30-870
Cow position: chr7:39793993-39794855 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 46-870
Cow position: chr7:52802438-52801611 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 59-387
Cow position: chr7:39144066-39144370 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 76-722
Cow position: chr7:50659148-50658535 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 84-853
Cow position: chr7:31437378-31438104 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 101-719
Cow position: chr7:37022280-37022899 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 396
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 110, 58

Conread position: 124-853
Cow position: chr7:67669286-67670006 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 36

Conread position: 137-847
Cow position: chr7:40509189-40509867 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 440
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 317, 22

Conread position: 209-799
Cow position: chr7:27107433-27106835 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 100

Conread position: 211-487
Cow position: chr7:7003305-7003043 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 232-843
Cow position: chr7:55635729-55635117 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 268-864
Cow position: chr7:34211542-34212124 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 385
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 103

Conread position: 295-774
Cow position: chr7:63380469-63379989 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 298
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 54

Conread position: 328-870
Cow position: chr7:45614033-45613484 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 341
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 54

Conread position: 362-831
Cow position: chr7:24527122-24527594 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 18

Conread position: 371-870
Cow position: chr7:56999709-56999232 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 33

Conread position: 384-704
Cow position: chr7:55996-56329 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 105, 7

Conread position: 407-870
Cow position: chr7:29745017-29744557 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 42

Conread position: 431-847
Cow position: chr7:1549960-1549545 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 267
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 33

Conread position: 533-870
Cow position: chr7:20116554-20116882 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.