Cow genome map

Conread name: LyN1-MLN01A100079

Conread position: 11-669
Cow position: chr8:11776966-11777620 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 422
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 148

Conread position: 11-825
Cow position: chr8:23254366-23255157 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 518
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 66

Conread position: 12-364
Cow position: chr8:48801870-48801519 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 89

Conread position: 12-636
Cow position: chr8:43180690-43180089 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 407
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 119

Conread position: 12-850
Cow position: chr8:1501966-1501127 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 160

Conread position: 12-870
Cow position: chr8:5019317-5020181 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 12-870
Cow position: chr8:8104021-8103128 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 236

Conread position: 13-837
Cow position: chr8:47888158-47888994 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 171

Conread position: 13-861
Cow position: chr8:21092029-21091165 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 123

Conread position: 15-372
Cow position: chr8:41643375-41643014 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 156

Conread position: 16-291
Cow position: chr8:1346935-1346655 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 143

Conread position: 16-324
Cow position: chr8:38088226-38088542 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 100

Conread position: 16-325
Cow position: chr8:51068376-51068690 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 55, 143

Conread position: 16-358
Cow position: chr8:12088868-12089211 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 70

Conread position: 16-363
Cow position: chr8:50996101-50996451 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 143

Conread position: 16-366
Cow position: chr8:18291684-18291332 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 137

Conread position: 16-372
Cow position: chr8:10741331-10740970 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-392
Cow position: chr8:4296424-4296809 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 85

Conread position: 16-402
Cow position: chr8:36810452-36810838 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 55, 143

Conread position: 16-432
Cow position: chr8:29008916-29009333 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-436
Cow position: chr8:43542241-43541817 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 143

Conread position: 16-447
Cow position: chr8:16733111-16733532 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 143

Conread position: 16-461
Cow position: chr8:21042316-21041866 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 143

Conread position: 16-478
Cow position: chr8:13372210-13372676 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 300
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 155

Conread position: 16-481
Cow position: chr8:45793440-45792972 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 16-481
Cow position: chr8:59260636-59260164 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 16-487
Cow position: chr8:36786488-36786011 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 16-503
Cow position: chr8:24874249-24873784 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 323
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 93

Conread position: 16-559
Cow position: chr8:1581762-1582312 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 137

Conread position: 16-651
Cow position: chr8:17382803-17382154 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 88

Conread position: 16-670
Cow position: chr8:58184309-58183676 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 397
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 109, 70

Conread position: 16-711
Cow position: chr8:24870176-24869482 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 456
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 55, 119

Conread position: 16-718
Cow position: chr8:26623708-26624406 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 460
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 57, 143

Conread position: 16-736
Cow position: chr8:42153987-42153268 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 133

Conread position: 16-783
Cow position: chr8:12447095-12446318 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 157

Conread position: 16-810
Cow position: chr8:6465185-6465993 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 91

Conread position: 16-810
Cow position: chr8:15223120-15223926 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 16-838
Cow position: chr8:39358351-39359161 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 86

Conread position: 16-849
Cow position: chr8:49219249-49220099 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 144

Conread position: 16-850
Cow position: chr8:3955362-3956194 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 140

Conread position: 16-850
Cow position: chr8:14257395-14258241 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 84

Conread position: 16-852
Cow position: chr8:12805078-12805932 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 148

Conread position: 16-861
Cow position: chr8:42318961-42318102 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 16-868
Cow position: chr8:14926570-14925713 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 144

Conread position: 16-868
Cow position: chr8:17313348-17314212 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-868
Cow position: chr8:53837256-53838105 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 16-868
Cow position: chr8:55272216-55271355 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 16-869
Cow position: chr8:10750657-10751522 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 141

Conread position: 16-869
Cow position: chr8:19332885-19333750 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:1151961-1151115 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 84

Conread position: 16-870
Cow position: chr8:2168206-2167349 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 134

Conread position: 16-870
Cow position: chr8:3333338-3334208 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 125

Conread position: 16-870
Cow position: chr8:4688717-4689575 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 16-870
Cow position: chr8:8913036-8913899 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:9737845-9738696 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 16-870
Cow position: chr8:12451356-12452228 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:14589562-14588697 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:23772946-23773811 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 99

Conread position: 16-870
Cow position: chr8:24913978-24913121 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:25412933-25413786 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 16-870
Cow position: chr8:25774332-25773462 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:30156415-30157277 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:33590693-33591535 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 16-870
Cow position: chr8:35471615-35472477 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 16-870
Cow position: chr8:38392939-38393809 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 145

Conread position: 16-870
Cow position: chr8:39193610-39192732 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 144

Conread position: 16-870
Cow position: chr8:47660006-47659156 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 141

Conread position: 16-870
Cow position: chr8:50928790-50927929 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 17-481
Cow position: chr8:36634188-36633737 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 134

Conread position: 17-868
Cow position: chr8:22569989-22569122 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 24-247
Cow position: chr8:25524697-25524925 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 135

Conread position: 24-850
Cow position: chr8:44241369-44240536 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 135

Conread position: 28-350
Cow position: chr8:9943386-9943067 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 72

Conread position: 45-536
Cow position: chr8:38894534-38895009 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 119-870
Cow position: chr8:46217191-46216426 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 40

Conread position: 129-850
Cow position: chr8:49285634-49284909 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 39

Conread position: 153-514
Cow position: chr8:45179580-45179930 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 21

Conread position: 153-850
Cow position: chr8:33372796-33372109 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 77

Conread position: 181-447
Cow position: chr8:20091125-20090864 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 204, 92

Conread position: 240-481
Cow position: chr8:32317047-32316807 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 273-454
Cow position: chr8:41920044-41919860 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 86

Conread position: 291-681
Cow position: chr8:47634765-47635178 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 262
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 180

Conread position: 327-720
Cow position: chr8:18684662-18684272 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 234, 48

Conread position: 331-744
Cow position: chr8:32814992-32814562 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 341-780
Cow position: chr8:948017-947572 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 432-831
Cow position: chr8:34270392-34270782 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 173

Conread position: 442-741
Cow position: chr8:31210108-31209807 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 112, 7

Conread position: 443-867
Cow position: chr8:41919573-41919156 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 53

Conread position: 527-853
Cow position: chr8:54381926-54381622 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 10

Show alignments to all cow chromosomes.