Cow genome map


           Conread name:
           LyN1-MLN01A100079
        

               Conread position:
               8-844
               

               Cow position:
               
               

               Alignm length:
               855
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 158
               

               Conread position:
               11-350
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               11-521
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               11-870
               

               Cow position:
               
               

               Alignm length:
               892
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 161
               

               Conread position:
               12-870
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 168
               

               Conread position:
               12-870
               

               Cow position:
               
               

               Alignm length:
               883
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 168
               

               Conread position:
               12-870
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               12-870
               

               Cow position:
               
               

               Alignm length:
               897
               

               Alignm identity:
               644
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               13-465
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               298
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               10, 148
               

               Conread position:
               15-242
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 141
               

               Conread position:
               15-863
               

               Cow position:
               
               

               Alignm length:
               883
               

               Alignm identity:
               614
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 85
               

               Conread position:
               16-273
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               16-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 105
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-293
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               16-306
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               16-315
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               16-317
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-339
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               16-348
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-372
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 133
               

               Conread position:
               16-464
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               302
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               57, 120
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 92
               

               Conread position:
               16-478
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 98
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-500
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               16-544
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 87
               

               Conread position:
               16-559
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               16-645
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               416
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               16-670
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               430
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               16-672
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               419
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               16-769
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-776
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 144
               

               Conread position:
               16-799
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-825
               

               Cow position:
               
               

               Alignm length:
               832
               

               Alignm identity:
               516
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               16-850
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               16-868
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 125
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               876
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               16-870
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               23-556
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               343
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               46, 136
               

               Conread position:
               30-350
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               30-520
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               30-850
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 160
               

               Conread position:
               32-869
               

               Cow position:
               
               

               Alignm length:
               864
               

               Alignm identity:
               533
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               35-870
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 122
               

               Conread position:
               55-587
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               115-870
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 48
               

               Conread position:
               137-870
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               138-554
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               167-829
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 54
               

               Conread position:
               167-870
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 204
               

               Conread position:
               175-557
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               89, 279
               

               Conread position:
               181-777
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               227-815
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               378
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               177, 40
               

               Conread position:
               296-870
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               365
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               160, 75
               

               Conread position:
               327-870
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               345-870
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               382-806
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               383-861
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 170
               

               Conread position:
               427-853
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 113
               
Show alignments to all cow chromosomes.