Cow genome map
| Conread name: | LyN1-MLN01A100079 |
| Conread position: | 8-844 |
| Cow position: | chr9:9198072-9198905 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 158 |
| Conread position: | 11-350 |
| Cow position: | chr9:4307396-4307049 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 11-521 |
| Cow position: | chr9:14040226-14039729 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 11-870 |
| Cow position: | chr9:28023764-28024647 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 161 |
| Conread position: | 12-870 |
| Cow position: | chr9:650085-649222 (view UCSC Genome Browser custom track) |
| Alignm length: | 885 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 168 |
| Conread position: | 12-870 |
| Cow position: | chr9:3310577-3311447 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 168 |
| Conread position: | 12-870 |
| Cow position: | chr9:5005942-5006811 (view UCSC Genome Browser custom track) |
| Alignm length: | 884 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 74 |
| Conread position: | 12-870 |
| Cow position: | chr9:50063979-50063107 (view UCSC Genome Browser custom track) |
| Alignm length: | 897 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 13-465 |
| Cow position: | chr9:17062431-17061975 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 298 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 15-242 |
| Cow position: | chr9:26737890-26738119 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 15-863 |
| Cow position: | chr9:55316337-55315488 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 16-273 |
| Cow position: | chr9:31066684-31066948 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 16-283 |
| Cow position: | chr9:27784151-27784418 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 16-284 |
| Cow position: | chr9:6300546-6300820 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-293 |
| Cow position: | chr9:50792683-50792965 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 16-306 |
| Cow position: | chr9:19077636-19077925 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 16-315 |
| Cow position: | chr9:220581-220278 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 16-317 |
| Cow position: | chr9:2607603-2607909 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-319 |
| Cow position: | chr9:2200516-2200826 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-339 |
| Cow position: | chr9:27690957-27690622 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 16-348 |
| Cow position: | chr9:24422990-24422652 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-372 |
| Cow position: | chr9:129230-128870 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 16-464 |
| Cow position: | chr9:35937052-35936601 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 16-478 |
| Cow position: | chr9:31091144-31091610 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 92 |
| Conread position: | 16-478 |
| Cow position: | chr9:42311655-42312118 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 16-481 |
| Cow position: | chr9:51180212-51179743 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-500 |
| Cow position: | chr9:37160851-37160367 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 16-544 |
| Cow position: | chr9:56266555-56266013 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 16-559 |
| Cow position: | chr9:5535257-5534710 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 94 |
| Conread position: | 16-645 |
| Cow position: | chr9:25211836-25212478 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 416 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 16-670 |
| Cow position: | chr9:2552457-2551790 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 430 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 57, 130 |
| Conread position: | 16-672 |
| Cow position: | chr9:12726419-12727076 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 419 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 16-769 |
| Cow position: | chr9:6251222-6251999 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-776 |
| Cow position: | chr9:2213107-2213875 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 144 |
| Conread position: | 16-799 |
| Cow position: | chr9:16177555-16178352 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-825 |
| Cow position: | chr9:23420576-23421373 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 516 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 16-850 |
| Cow position: | chr9:19157320-19156477 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 16-850 |
| Cow position: | chr9:45875480-45876328 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 16-868 |
| Cow position: | chr9:1250035-1249171 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 16-868 |
| Cow position: | chr9:2807397-2806536 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 141 |
| Conread position: | 16-868 |
| Cow position: | chr9:14002023-14002866 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 16-870 |
| Cow position: | chr9:7060103-7059237 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 16-870 |
| Cow position: | chr9:9015033-9015902 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 16-870 |
| Cow position: | chr9:10938692-10939552 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 16-870 |
| Cow position: | chr9:17304004-17303144 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 16-870 |
| Cow position: | chr9:18507865-18506996 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 16-870 |
| Cow position: | chr9:21411273-21412140 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 16-870 |
| Cow position: | chr9:27037071-27037936 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 16-870 |
| Cow position: | chr9:44204110-44203241 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 16-870 |
| Cow position: | chr9:47004702-47005569 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 16-870 |
| Cow position: | chr9:47043930-47044775 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 16-870 |
| Cow position: | chr9:56302480-56301612 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 23-556 |
| Cow position: | chr9:14044599-14045130 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 343 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 30-350 |
| Cow position: | chr9:45897728-45898052 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 36, 129 |
| Conread position: | 30-520 |
| Cow position: | chr9:36316306-36316775 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 30-850 |
| Cow position: | chr9:35594109-35593280 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 32-869 |
| Cow position: | chr9:4648640-4647810 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 533 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 35-870 |
| Cow position: | chr9:7004713-7005547 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 55-587 |
| Cow position: | chr9:19308354-19308888 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 115-870 |
| Cow position: | chr9:32971444-32972195 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 48 |
| Conread position: | 137-870 |
| Cow position: | chr9:59480763-59480020 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 138-554 |
| Cow position: | chr9:45433150-45432735 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 167-829 |
| Cow position: | chr9:56042838-56042221 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 54 |
| Conread position: | 167-870 |
| Cow position: | chr9:28658933-28658221 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 204 |
| Conread position: | 175-557 |
| Cow position: | chr9:45475777-45475383 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 89, 279 |
| Conread position: | 181-777 |
| Cow position: | chr9:43303087-43302483 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 227-815 |
| Cow position: | chr9:2288958-2288358 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 378 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 177, 40 |
| Conread position: | 296-870 |
| Cow position: | chr9:27782646-27782062 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 365 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 160, 75 |
| Conread position: | 327-870 |
| Cow position: | chr9:24723060-24723596 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 345-870 |
| Cow position: | chr9:22655107-22655641 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 382-806 |
| Cow position: | chr9:5702719-5703145 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 383-861 |
| Cow position: | chr9:4980590-4981070 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 170 |
| Conread position: | 427-853 |
| Cow position: | chr9:26188914-26189345 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 113 |
Show alignments to all cow chromosomes.