Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-180 |
| Cow position: | chr10:29846664-29846485 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-203 |
| Cow position: | chr10:39904873-39905072 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-248 |
| Cow position: | chr10:60489605-60489841 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-262 |
| Cow position: | chr10:54059409-54059150 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-284 |
| Cow position: | chr10:276539-276817 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-312 |
| Cow position: | chr10:19143393-19143082 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-353 |
| Cow position: | chr10:38538552-38538196 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 1-369 |
| Cow position: | chr10:7282738-7282374 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-374 |
| Cow position: | chr10:62408910-62408539 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-379 |
| Cow position: | chr10:47906723-47907101 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-380 |
| Cow position: | chr10:1375482-1375857 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 18 |
| Conread position: | 1-380 |
| Cow position: | chr10:2123317-2122938 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr10:4192272-4191902 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr10:16925480-16925859 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr10:21400726-21400347 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 1-380 |
| Cow position: | chr10:21486860-21487239 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 1-380 |
| Cow position: | chr10:32650678-32651057 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-380 |
| Cow position: | chr10:41567052-41567426 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-380 |
| Cow position: | chr10:51952660-51952298 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-391 |
| Cow position: | chr10:34685841-34686229 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 17 |
| Conread position: | 1-393 |
| Cow position: | chr10:10478202-10477798 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 1-393 |
| Cow position: | chr10:62216552-62216944 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 1-393 |
| Cow position: | chr10:62778291-62778685 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 1-425 |
| Cow position: | chr10:19511551-19511976 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-425 |
| Cow position: | chr10:25498297-25498725 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-431 |
| Cow position: | chr10:280674-280241 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 1-431 |
| Cow position: | chr10:11685722-11685291 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-431 |
| Cow position: | chr10:14803780-14804218 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-431 |
| Cow position: | chr10:19496341-19495904 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-431 |
| Cow position: | chr10:21740806-21740370 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 1-431 |
| Cow position: | chr10:25565300-25564876 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 1-431 |
| Cow position: | chr10:41876864-41877300 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-433 |
| Cow position: | chr10:39817405-39816979 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 1-443 |
| Cow position: | chr10:39179729-39180179 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-485 |
| Cow position: | chr10:24298906-24298431 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 1-502 |
| Cow position: | chr10:38546277-38545786 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 17 |
| Conread position: | 1-516 |
| Cow position: | chr10:46191313-46191811 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 4-318 |
| Cow position: | chr10:29632912-29632601 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 4-380 |
| Cow position: | chr10:8289931-8290302 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 4-390 |
| Cow position: | chr10:46694427-46694044 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 4-430 |
| Cow position: | chr10:14951842-14952242 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 4-516 |
| Cow position: | chr10:38847317-38847801 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 422, 14 |
| Conread position: | 5-431 |
| Cow position: | chr10:41157397-41157829 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 5-516 |
| Cow position: | chr10:15862185-15861675 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 13 |
| Conread position: | 6-414 |
| Cow position: | chr10:42109679-42110071 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 9-421 |
| Cow position: | chr10:124265-124676 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 9 |
| Conread position: | 9-426 |
| Cow position: | chr10:29696190-29696602 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 18-460 |
| Cow position: | chr10:184225-184673 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 158, 119 |
| Conread position: | 18-486 |
| Cow position: | chr10:14859939-14860393 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 87 |
| Conread position: | 23-374 |
| Cow position: | chr10:22101200-22101548 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 32-258 |
| Cow position: | chr10:54979903-54979681 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 34-393 |
| Cow position: | chr10:40152475-40152117 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 100 |
| Conread position: | 38-516 |
| Cow position: | chr10:49310489-49310945 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-480 |
| Cow position: | chr10:33346639-33347021 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 120-485 |
| Cow position: | chr10:8328209-8327846 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 181 |
| Conread position: | 136-418 |
| Cow position: | chr10:63841382-63841663 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 165-506 |
| Cow position: | chr10:42628732-42629071 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 0 |
| Conread position: | 170-489 |
| Cow position: | chr10:31523913-31524229 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 181-449 |
| Cow position: | chr10:60192256-60192523 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 150, 173 |
| Conread position: | 220-479 |
| Cow position: | chr10:22842914-22843172 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 206, 21 |
| Conread position: | 247-502 |
| Cow position: | chr10:54979280-54979031 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 123 |
| Conread position: | 276-379 |
| Cow position: | chr10:68599073-68598970 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 282-444 |
| Cow position: | chr10:42679599-42679761 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 142 |
| Conread position: | 299-516 |
| Cow position: | chr10:28931570-28931353 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 109, 30 |
| Conread position: | 308-520 |
| Cow position: | chr10:60489846-60490056 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 328-502 |
| Cow position: | chr10:8339168-8339339 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 136, 33 |
Show alignments to all cow chromosomes.