Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-147 |
| Cow position: | chr11:46962833-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 1-147 |
| Cow position: | chr11:77235349-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-271 |
| Cow position: | chr11:15998478-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-281 |
| Cow position: | chr11:44496012-44495732 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 17 |
| Conread position: | 1-352 |
| Cow position: | chr11:9157842-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 1-368 |
| Cow position: | chr11:28230165-28229803 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-369 |
| Cow position: | chr11:77728942-77728569 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 17 |
| Conread position: | 1-372 |
| Cow position: | chr11:19102903-19102532 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-374 |
| Cow position: | chr11:29669045-29668675 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-374 |
| Cow position: | chr11:37093478-37093106 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-378 |
| Cow position: | chr11:7113183-7113554 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 17 |
| Conread position: | 1-380 |
| Cow position: | chr11:4271286-4270899 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 1-380 |
| Cow position: | chr11:5343634-5343255 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr11:10847028-10847404 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 1-380 |
| Cow position: | chr11:37477535-37477157 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 1-380 |
| Cow position: | chr11:38835833-38835469 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr11:63659998-63659626 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-380 |
| Cow position: | chr11:85394225-85393849 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-381 |
| Cow position: | chr11:34020487-34020853 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 17 |
| Conread position: | 1-390 |
| Cow position: | chr11:28063274-28063648 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 1-391 |
| Cow position: | chr11:9659815-9659414 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 1-391 |
| Cow position: | chr11:37065540-37065145 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 1-393 |
| Cow position: | chr11:9606991-9606603 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-393 |
| Cow position: | chr11:21466660-21467052 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-393 |
| Cow position: | chr11:37492065-37491671 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 1-393 |
| Cow position: | chr11:45110944-45111344 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 1-393 |
| Cow position: | chr11:61401456-61401076 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 1-393 |
| Cow position: | chr11:75919998-75920377 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 1-411 |
| Cow position: | chr11:8262116-8261713 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-420 |
| Cow position: | chr11:12351480-12351061 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 1-425 |
| Cow position: | chr11:58133953-58134396 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-425 |
| Cow position: | chr11:66726049-66726478 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 1-430 |
| Cow position: | chr11:20921162-20920726 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-430 |
| Cow position: | chr11:52418971-52419407 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 1-431 |
| Cow position: | chr11:3492596-3493031 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 17 |
| Conread position: | 1-431 |
| Cow position: | chr11:17108102-17107666 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 1-431 |
| Cow position: | chr11:19064666-19064229 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-431 |
| Cow position: | chr11:32450451-32450887 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr11:36744597-36744160 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-431 |
| Cow position: | chr11:53287871-53287436 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 1-431 |
| Cow position: | chr11:67450081-67450518 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr11:67846984-67846551 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 104 |
| Conread position: | 1-443 |
| Cow position: | chr11:57628463-57628012 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-502 |
| Cow position: | chr11:10089919-10090425 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 17 |
| Conread position: | 3-431 |
| Cow position: | chr11:15983209-15983644 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 4-380 |
| Cow position: | chr11:1496484-1496112 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 4-381 |
| Cow position: | chr11:8887564-8887195 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-393 |
| Cow position: | chr11:25527159-25527533 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 4-478 |
| Cow position: | chr11:42428924-42429394 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 5-333 |
| Cow position: | chr11:10210371-10210048 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 5-380 |
| Cow position: | chr11:26125343-26124969 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 6-380 |
| Cow position: | chr11:71329232-71329606 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 7-503 |
| Cow position: | chr11:8282668-8283159 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 8-380 |
| Cow position: | chr11:44157643-44157291 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 9-373 |
| Cow position: | chr11:12358830-12358470 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 10-378 |
| Cow position: | chr11:4041477-4041116 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 35-286 |
| Cow position: | chr11:32684907-32685152 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 201, 52 |
| Conread position: | 107-400 |
| Cow position: | chr11:48084803-48085092 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 181-449 |
| Cow position: | chr11:4065471-4065199 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 247 |
| Conread position: | 193-431 |
| Cow position: | chr11:33194778-33194533 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 205-390 |
| Cow position: | chr11:9220333-9220147 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 270-390 |
| Cow position: | chr11:59369460-59369580 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-393 |
| Cow position: | chr11:8267681-8267567 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-472 |
| Cow position: | chr11:10050589-10050764 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 351-500 |
| Cow position: | chr11:30125106-30124955 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 69 |
Show alignments to all cow chromosomes.