Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-143 |
| Cow position: | chr16:24881509-24881369 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-367 |
| Cow position: | chr16:40296995-40296633 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 1-370 |
| Cow position: | chr16:27734624-27734253 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-374 |
| Cow position: | chr16:12538744-12538373 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 1-374 |
| Cow position: | chr16:14666650-14666277 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 1-374 |
| Cow position: | chr16:15183983-15184355 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-376 |
| Cow position: | chr16:5918665-5919037 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-380 |
| Cow position: | chr16:1568273-1567896 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-380 |
| Cow position: | chr16:2239553-2239182 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 1-380 |
| Cow position: | chr16:5483502-5483881 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr16:8816925-8816546 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr16:25440799-25441182 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 17 |
| Conread position: | 1-380 |
| Cow position: | chr16:25458290-25457907 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 17 |
| Conread position: | 1-380 |
| Cow position: | chr16:26662928-26663307 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr16:29046201-29046580 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 1-387 |
| Cow position: | chr16:2411789-2411403 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 1-389 |
| Cow position: | chr16:56551309-56551688 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 17 |
| Conread position: | 1-393 |
| Cow position: | chr16:2483959-2483571 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 1-393 |
| Cow position: | chr16:6549341-6548953 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr16:10808336-10808721 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-393 |
| Cow position: | chr16:20255130-20254740 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-393 |
| Cow position: | chr16:23982492-23982881 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 1-393 |
| Cow position: | chr16:25084803-25085192 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-425 |
| Cow position: | chr16:34529506-34529925 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 1-425 |
| Cow position: | chr16:39820815-39821237 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 1-431 |
| Cow position: | chr16:31928-32354 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 1-431 |
| Cow position: | chr16:5661041-5661466 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 1-431 |
| Cow position: | chr16:6942803-6943248 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-486 |
| Cow position: | chr16:9929726-9930197 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 17 |
| Conread position: | 1-498 |
| Cow position: | chr16:49257402-49256908 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 1-502 |
| Cow position: | chr16:42740239-42739744 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 1-503 |
| Cow position: | chr16:25157038-25156541 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 17 |
| Conread position: | 2-380 |
| Cow position: | chr16:25341149-25341523 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 3-472 |
| Cow position: | chr16:31376079-31375633 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 4-425 |
| Cow position: | chr16:836212-836634 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 7-198 |
| Cow position: | chr16:18687935-18687749 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 7-387 |
| Cow position: | chr16:36282586-36282963 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 7-391 |
| Cow position: | chr16:51685620-51686004 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 9-380 |
| Cow position: | chr16:23253317-23252949 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 18-224 |
| Cow position: | chr16:32606026-32606231 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 18-268 |
| Cow position: | chr16:4303275-4303031 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 18-431 |
| Cow position: | chr16:25187840-25188252 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 114 |
| Conread position: | 23-367 |
| Cow position: | chr16:10437445-10437788 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 23-388 |
| Cow position: | chr16:11052366-11052726 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 42 |
| Conread position: | 23-486 |
| Cow position: | chr16:32935362-32935832 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 93 |
| Conread position: | 31-393 |
| Cow position: | chr16:19713676-19713318 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 37-426 |
| Cow position: | chr16:2728084-2727683 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 40-394 |
| Cow position: | chr16:36362138-36361790 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 40 |
| Conread position: | 56-374 |
| Cow position: | chr16:9777319-9777637 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 103-502 |
| Cow position: | chr16:49235863-49235471 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 133-393 |
| Cow position: | chr16:7905932-7906190 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 155-408 |
| Cow position: | chr16:18500014-18499767 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 155-431 |
| Cow position: | chr16:31831964-31832248 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 179-406 |
| Cow position: | chr16:30047850-30048078 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 186, 38 |
| Conread position: | 185-478 |
| Cow position: | chr16:52815124-52814836 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 104 |
| Conread position: | 207-502 |
| Cow position: | chr16:29033102-29033394 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 217-408 |
| Cow position: | chr16:48626629-48626818 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 88 |
| Conread position: | 220-403 |
| Cow position: | chr16:25153128-25153304 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 253-502 |
| Cow position: | chr16:16273403-16273156 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 261-391 |
| Cow position: | chr16:29675939-29675810 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 273-502 |
| Cow position: | chr16:25257055-25257281 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 296-489 |
| Cow position: | chr16:5889392-5889582 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 308-479 |
| Cow position: | chr16:23807454-23807625 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 52 |
Show alignments to all cow chromosomes.