Cow genome map
Conread name: | LyN1-MLN01A120092 |
Conread position: | 1-159 |
Cow position: | chr17:28109843-28110002 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 136, 17 |
Conread position: | 1-223 |
Cow position: | chr17:15322575-15322788 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 166 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 1-269 |
Cow position: | chr17:22160673-22160941 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-305 |
Cow position: | chr17:24780805-24781109 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-361 |
Cow position: | chr17:16859799-16859451 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-364 |
Cow position: | chr17:2555880-2556242 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-374 |
Cow position: | chr17:11087967-11087594 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-374 |
Cow position: | chr17:13857012-13856639 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-377 |
Cow position: | chr17:9653699-9653323 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-380 |
Cow position: | chr17:3643079-3642700 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 130 |
Conread position: | 1-380 |
Cow position: | chr17:13929425-13929804 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 133 |
Conread position: | 1-380 |
Cow position: | chr17:14893918-14894289 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr17:16889882-16890259 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 17 |
Conread position: | 1-381 |
Cow position: | chr17:20183470-20183097 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-381 |
Cow position: | chr17:27345562-27345935 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 126 |
Conread position: | 1-387 |
Cow position: | chr17:2173637-2174022 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 107 |
Conread position: | 1-391 |
Cow position: | chr17:2287146-2287533 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-391 |
Cow position: | chr17:18027000-18026610 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 125 |
Conread position: | 1-392 |
Cow position: | chr17:15143612-15143219 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 136 |
Conread position: | 1-392 |
Cow position: | chr17:15157204-15156816 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-393 |
Cow position: | chr17:2248824-2248435 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 77 |
Conread position: | 1-393 |
Cow position: | chr17:6089404-6089012 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-393 |
Cow position: | chr17:22429725-22429339 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 91 |
Conread position: | 1-393 |
Cow position: | chr17:23857277-23856885 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 17 |
Conread position: | 1-393 |
Cow position: | chr17:24633711-24634103 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-420 |
Cow position: | chr17:6259602-6260021 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-425 |
Cow position: | chr17:1946735-1947152 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 94 |
Conread position: | 1-425 |
Cow position: | chr17:35591972-35592399 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-427 |
Cow position: | chr17:14217267-14216836 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-431 |
Cow position: | chr17:8208864-8209300 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-431 |
Cow position: | chr17:15435548-15435985 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-431 |
Cow position: | chr17:20665969-20665532 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-432 |
Cow position: | chr17:152714-152286 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 18 |
Conread position: | 1-515 |
Cow position: | chr17:4295124-4295613 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 47 |
Conread position: | 2-380 |
Cow position: | chr17:228544-228172 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 2-431 |
Cow position: | chr17:20087972-20087555 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 4-380 |
Cow position: | chr17:18103920-18103549 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 127 |
Conread position: | 4-414 |
Cow position: | chr17:1879852-1880267 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 131 |
Conread position: | 4-428 |
Cow position: | chr17:6002248-6001832 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 66 |
Conread position: | 4-428 |
Cow position: | chr17:44853174-44852744 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 124 |
Conread position: | 4-446 |
Cow position: | chr17:1658811-1658365 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 14 |
Conread position: | 5-393 |
Cow position: | chr17:4059864-4060248 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 73 |
Conread position: | 5-502 |
Cow position: | chr17:14325733-14325257 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 13 |
Conread position: | 18-380 |
Cow position: | chr17:1383039-1382678 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 25-380 |
Cow position: | chr17:15850182-15850533 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 70 |
Conread position: | 25-480 |
Cow position: | chr17:42264287-42264733 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 257, 79 |
Conread position: | 32-185 |
Cow position: | chr17:1283993-1283847 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 55-393 |
Cow position: | chr17:18185721-18185386 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 70 |
Conread position: | 76-506 |
Cow position: | chr17:15370879-15371308 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 166 |
Conread position: | 82-484 |
Cow position: | chr17:20401513-20401898 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 53 |
Conread position: | 99-399 |
Cow position: | chr17:18325135-18324844 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 212 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 127, 37 |
Conread position: | 165-408 |
Cow position: | chr17:3709283-3709047 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 186-393 |
Cow position: | chr17:1283763-1283556 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 213-380 |
Cow position: | chr17:43952593-43952427 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 140 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 221-408 |
Cow position: | chr17:22557599-22557786 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 149 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 51, 69 |
Conread position: | 226-380 |
Cow position: | chr17:34156110-34156264 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 133 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.