Cow genome map

Conread name: LyN1-MLN01A120092

Conread position: 1-159
Cow position: chr17:28109843-28110002 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 17

Conread position: 1-223
Cow position: chr17:15322575-15322788 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 1-269
Cow position: chr17:22160673-22160941 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-305
Cow position: chr17:24780805-24781109 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-361
Cow position: chr17:16859799-16859451 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-364
Cow position: chr17:2555880-2556242 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-374
Cow position: chr17:11087967-11087594 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-374
Cow position: chr17:13857012-13856639 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-377
Cow position: chr17:9653699-9653323 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-380
Cow position: chr17:3643079-3642700 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 1-380
Cow position: chr17:13929425-13929804 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 133

Conread position: 1-380
Cow position: chr17:14893918-14894289 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-380
Cow position: chr17:16889882-16890259 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 17

Conread position: 1-381
Cow position: chr17:20183470-20183097 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-381
Cow position: chr17:27345562-27345935 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 1-387
Cow position: chr17:2173637-2174022 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 107

Conread position: 1-391
Cow position: chr17:2287146-2287533 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-391
Cow position: chr17:18027000-18026610 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 1-392
Cow position: chr17:15143612-15143219 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 1-392
Cow position: chr17:15157204-15156816 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-393
Cow position: chr17:2248824-2248435 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 1-393
Cow position: chr17:6089404-6089012 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-393
Cow position: chr17:22429725-22429339 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 1-393
Cow position: chr17:23857277-23856885 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 1-393
Cow position: chr17:24633711-24634103 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-420
Cow position: chr17:6259602-6260021 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-425
Cow position: chr17:1946735-1947152 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 94

Conread position: 1-425
Cow position: chr17:35591972-35592399 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-427
Cow position: chr17:14217267-14216836 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-431
Cow position: chr17:8208864-8209300 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-431
Cow position: chr17:15435548-15435985 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-431
Cow position: chr17:20665969-20665532 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-432
Cow position: chr17:152714-152286 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 1-515
Cow position: chr17:4295124-4295613 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 2-380
Cow position: chr17:228544-228172 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 2-431
Cow position: chr17:20087972-20087555 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 4-380
Cow position: chr17:18103920-18103549 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 127

Conread position: 4-414
Cow position: chr17:1879852-1880267 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 131

Conread position: 4-428
Cow position: chr17:6002248-6001832 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 66

Conread position: 4-428
Cow position: chr17:44853174-44852744 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 4-446
Cow position: chr17:1658811-1658365 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 5-393
Cow position: chr17:4059864-4060248 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 5-502
Cow position: chr17:14325733-14325257 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 13

Conread position: 18-380
Cow position: chr17:1383039-1382678 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 25-380
Cow position: chr17:15850182-15850533 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 70

Conread position: 25-480
Cow position: chr17:42264287-42264733 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 79

Conread position: 32-185
Cow position: chr17:1283993-1283847 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 55-393
Cow position: chr17:18185721-18185386 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 70

Conread position: 76-506
Cow position: chr17:15370879-15371308 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 166

Conread position: 82-484
Cow position: chr17:20401513-20401898 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 53

Conread position: 99-399
Cow position: chr17:18325135-18324844 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 127, 37

Conread position: 165-408
Cow position: chr17:3709283-3709047 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 186-393
Cow position: chr17:1283763-1283556 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 213-380
Cow position: chr17:43952593-43952427 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 221-408
Cow position: chr17:22557599-22557786 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 69

Conread position: 226-380
Cow position: chr17:34156110-34156264 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 133
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.