Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-195 |
| Cow position: | chr18:16660040-16659846 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 1-373 |
| Cow position: | chr18:19352351-19352722 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-374 |
| Cow position: | chr18:14415941-14416313 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr18:23797614-23797991 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-380 |
| Cow position: | chr18:28973938-28973559 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr18:36508298-36508676 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr18:41840860-41840481 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr18:47741983-47742362 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr18:51480802-51481183 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-380 |
| Cow position: | chr18:55088960-55088581 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 1-381 |
| Cow position: | chr18:23944406-23944030 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-381 |
| Cow position: | chr18:51310547-51310928 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 1-387 |
| Cow position: | chr18:33358832-33359217 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-387 |
| Cow position: | chr18:43146959-43146574 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 17 |
| Conread position: | 1-387 |
| Cow position: | chr18:51341651-51342038 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-388 |
| Cow position: | chr18:2019721-2019335 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 1-388 |
| Cow position: | chr18:33335833-33336214 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 1-392 |
| Cow position: | chr18:14130354-14130741 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-393 |
| Cow position: | chr18:1521096-1521502 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 1-393 |
| Cow position: | chr18:6869292-6868902 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 1-393 |
| Cow position: | chr18:22602452-22602844 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-393 |
| Cow position: | chr18:32293736-32294115 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1-393 |
| Cow position: | chr18:47719618-47719227 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 1-393 |
| Cow position: | chr18:51689591-51689981 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 1-393 |
| Cow position: | chr18:53785804-53786194 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 18 |
| Conread position: | 1-414 |
| Cow position: | chr18:51257942-51258361 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-425 |
| Cow position: | chr18:16533944-16534369 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-425 |
| Cow position: | chr18:48221842-48222269 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-427 |
| Cow position: | chr18:11275141-11274708 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-431 |
| Cow position: | chr18:33953603-33953173 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 1-494 |
| Cow position: | chr18:2887056-2886564 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-502 |
| Cow position: | chr18:54171878-54171399 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 17 |
| Conread position: | 3-395 |
| Cow position: | chr18:5980409-5980788 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 5-194 |
| Cow position: | chr18:44621728-44621917 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 5-393 |
| Cow position: | chr18:54044732-54044366 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-391 |
| Cow position: | chr18:39748549-39748932 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 7-502 |
| Cow position: | chr18:29236784-29237273 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 91 |
| Conread position: | 18-319 |
| Cow position: | chr18:18897479-18897776 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 69 |
| Conread position: | 18-420 |
| Cow position: | chr18:52650914-52651304 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 58 |
| Conread position: | 23-318 |
| Cow position: | chr18:54024371-54024078 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 40-388 |
| Cow position: | chr18:35335482-35335831 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 51-431 |
| Cow position: | chr18:51463059-51462677 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 83 |
| Conread position: | 58-393 |
| Cow position: | chr18:19539557-19539228 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 72-479 |
| Cow position: | chr18:54269622-54270018 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 92-431 |
| Cow position: | chr18:46877947-46877611 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 301, 44 |
| Conread position: | 101-474 |
| Cow position: | chr18:16843270-16842904 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-393 |
| Cow position: | chr18:17992273-17992064 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-502 |
| Cow position: | chr18:56462711-56462444 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
Show alignments to all cow chromosomes.