Cow genome map
Conread name: | LyN1-MLN01A120092 |
Conread position: | 1-158 |
Cow position: | chr19:32193546-32193704 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 23, 14 |
Conread position: | 1-178 |
Cow position: | chr19:27052800-27052623 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 139 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 20, 132 |
Conread position: | 1-194 |
Cow position: | chr19:29209530-29209721 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 151 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-253 |
Cow position: | chr19:55078715-55078967 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-256 |
Cow position: | chr19:34389-34640 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 18, 112 |
Conread position: | 1-269 |
Cow position: | chr19:30372251-30372511 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 125 |
Conread position: | 1-279 |
Cow position: | chr19:32237711-32237440 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-286 |
Cow position: | chr19:31341675-31341976 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-347 |
Cow position: | chr19:350314-349976 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 125 |
Conread position: | 1-350 |
Cow position: | chr19:32244653-32245002 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-374 |
Cow position: | chr19:28581685-28581317 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-374 |
Cow position: | chr19:32665499-32665867 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-380 |
Cow position: | chr19:170771-170399 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 17 |
Conread position: | 1-380 |
Cow position: | chr19:33873396-33873774 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 98 |
Conread position: | 1-380 |
Cow position: | chr19:39390486-39390856 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 77 |
Conread position: | 1-381 |
Cow position: | chr19:203932-204310 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-381 |
Cow position: | chr19:416622-417009 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 122 |
Conread position: | 1-387 |
Cow position: | chr19:172180-172566 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 1-387 |
Cow position: | chr19:10672337-10671951 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 130 |
Conread position: | 1-387 |
Cow position: | chr19:28593246-28593619 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-425 |
Cow position: | chr19:4385450-4385863 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 185 |
Conread position: | 1-426 |
Cow position: | chr19:40852461-40852042 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 75 |
Conread position: | 1-431 |
Cow position: | chr19:43143685-43144122 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-502 |
Cow position: | chr19:32223470-32222980 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 98 |
Conread position: | 4-479 |
Cow position: | chr19:15953826-15954279 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 14 |
Conread position: | 4-479 |
Cow position: | chr19:30755150-30755615 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 60 |
Conread position: | 5-380 |
Cow position: | chr19:7342041-7342416 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 130 |
Conread position: | 8-431 |
Cow position: | chr19:772575-773002 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 10 |
Conread position: | 13-425 |
Cow position: | chr19:687049-687457 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 369, 15 |
Conread position: | 23-158 |
Cow position: | chr19:28376514-28376644 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 23-411 |
Cow position: | chr19:32202739-32203118 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 261 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 120, 55 |
Conread position: | 24-389 |
Cow position: | chr19:76260-75911 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 51 |
Conread position: | 29-336 |
Cow position: | chr19:261446-261749 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 34 |
Conread position: | 72-393 |
Cow position: | chr19:1032118-1032436 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 81-479 |
Cow position: | chr19:35376836-35377223 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 58 |
Conread position: | 88-506 |
Cow position: | chr19:352936-352509 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 46 |
Conread position: | 91-484 |
Cow position: | chr19:42248866-42249255 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 134-486 |
Cow position: | chr19:42649010-42648664 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 189-391 |
Cow position: | chr19:28376641-28376845 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 190-393 |
Cow position: | chr19:40817545-40817341 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 195-391 |
Cow position: | chr19:29209762-29209956 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 253-489 |
Cow position: | chr19:42906-43140 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 253-508 |
Cow position: | chr19:163209-162953 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 188 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 134, 155 |
Conread position: | 257-466 |
Cow position: | chr19:27052623-27052418 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 298-425 |
Cow position: | chr19:30372512-30372641 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 330-493 |
Cow position: | chr19:137058-136900 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 364-502 |
Cow position: | chr19:44532444-44532583 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 119, 52 |
Show alignments to all cow chromosomes.