Cow genome map

Conread name: LyN1-MLN01A120092

Conread position: 1-158
Cow position: chr19:32193546-32193704 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 14

Conread position: 1-178
Cow position: chr19:27052800-27052623 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 132

Conread position: 1-194
Cow position: chr19:29209530-29209721 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 17

Conread position: 1-253
Cow position: chr19:55078715-55078967 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-256
Cow position: chr19:34389-34640 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 112

Conread position: 1-269
Cow position: chr19:30372251-30372511 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 1-279
Cow position: chr19:32237711-32237440 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-286
Cow position: chr19:31341675-31341976 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-347
Cow position: chr19:350314-349976 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 1-350
Cow position: chr19:32244653-32245002 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-374
Cow position: chr19:28581685-28581317 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-374
Cow position: chr19:32665499-32665867 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-380
Cow position: chr19:170771-170399 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 17

Conread position: 1-380
Cow position: chr19:33873396-33873774 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 1-380
Cow position: chr19:39390486-39390856 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 1-381
Cow position: chr19:203932-204310 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-381
Cow position: chr19:416622-417009 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 122

Conread position: 1-387
Cow position: chr19:172180-172566 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 133

Conread position: 1-387
Cow position: chr19:10672337-10671951 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 1-387
Cow position: chr19:28593246-28593619 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-425
Cow position: chr19:4385450-4385863 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 185

Conread position: 1-426
Cow position: chr19:40852461-40852042 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 1-431
Cow position: chr19:43143685-43144122 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-502
Cow position: chr19:32223470-32222980 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 4-479
Cow position: chr19:15953826-15954279 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 4-479
Cow position: chr19:30755150-30755615 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 5-380
Cow position: chr19:7342041-7342416 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 130

Conread position: 8-431
Cow position: chr19:772575-773002 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 13-425
Cow position: chr19:687049-687457 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 15

Conread position: 23-158
Cow position: chr19:28376514-28376644 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 23-411
Cow position: chr19:32202739-32203118 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 120, 55

Conread position: 24-389
Cow position: chr19:76260-75911 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 51

Conread position: 29-336
Cow position: chr19:261446-261749 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 34

Conread position: 72-393
Cow position: chr19:1032118-1032436 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 81-479
Cow position: chr19:35376836-35377223 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 58

Conread position: 88-506
Cow position: chr19:352936-352509 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 46

Conread position: 91-484
Cow position: chr19:42248866-42249255 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 134-486
Cow position: chr19:42649010-42648664 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 189-391
Cow position: chr19:28376641-28376845 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 190-393
Cow position: chr19:40817545-40817341 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 193, 0

Conread position: 195-391
Cow position: chr19:29209762-29209956 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 253-489
Cow position: chr19:42906-43140 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 0

Conread position: 253-508
Cow position: chr19:163209-162953 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 134, 155

Conread position: 257-466
Cow position: chr19:27052623-27052418 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 298-425
Cow position: chr19:30372512-30372641 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 330-493
Cow position: chr19:137058-136900 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 364-502
Cow position: chr19:44532444-44532583 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 52

Show alignments to all cow chromosomes.