Cow genome map

Conread name: LyN1-MLN01A120092

Conread position: 1-155
Cow position: chr2:25888795-25888640 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 18

Conread position: 1-183
Cow position: chr2:40245470-40245649 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 18, 128

Conread position: 1-197
Cow position: chr2:41149455-41149650 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 91

Conread position: 1-236
Cow position: chr2:975866-975631 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 134

Conread position: 1-285
Cow position: chr2:26865131-26864860 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 1-298
Cow position: chr2:10730146-10729849 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 11

Conread position: 1-305
Cow position: chr2:24145687-24145985 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 1-336
Cow position: chr2:52655881-52656212 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 1-349
Cow position: chr2:85356357-85356019 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 1-369
Cow position: chr2:283281-282913 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 1-379
Cow position: chr2:14560611-14560969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 1-379
Cow position: chr2:26868685-26869056 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 1-380
Cow position: chr2:176117-175738 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-380
Cow position: chr2:212807-212431 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-380
Cow position: chr2:2413385-2413006 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-380
Cow position: chr2:28650814-28650441 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-380
Cow position: chr2:44090711-44091091 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-380
Cow position: chr2:65939035-65938660 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-381
Cow position: chr2:44106687-44106318 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 1-381
Cow position: chr2:52152439-52152073 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 18

Conread position: 1-387
Cow position: chr2:11969350-11968971 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 80

Conread position: 1-388
Cow position: chr2:59414268-59413882 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-390
Cow position: chr2:2380537-2380907 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 1-391
Cow position: chr2:2102056-2101669 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 1-391
Cow position: chr2:6772760-6772371 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 1-391
Cow position: chr2:82167020-82167410 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 136

Conread position: 1-392
Cow position: chr2:80516462-80516862 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 172

Conread position: 1-393
Cow position: chr2:3325153-3324761 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-393
Cow position: chr2:10712018-10711633 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 89

Conread position: 1-393
Cow position: chr2:41172100-41172483 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 1-393
Cow position: chr2:49471658-49472050 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-393
Cow position: chr2:52062078-52062470 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 1-393
Cow position: chr2:53473746-53473358 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-393
Cow position: chr2:72922420-72922028 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-413
Cow position: chr2:78741542-78741953 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 1-414
Cow position: chr2:78761887-78762296 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 96

Conread position: 1-420
Cow position: chr2:44935673-44935256 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 1-425
Cow position: chr2:5870922-5870522 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 1-425
Cow position: chr2:16076888-16076459 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 1-430
Cow position: chr2:25031064-25030629 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-431
Cow position: chr2:2184845-2184408 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 1-431
Cow position: chr2:9907324-9907761 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-431
Cow position: chr2:26921108-26921533 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-431
Cow position: chr2:47039001-47038566 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-431
Cow position: chr2:51991119-51990682 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-431
Cow position: chr2:52615883-52616318 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 135

Conread position: 1-431
Cow position: chr2:57142275-57141838 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 1-442
Cow position: chr2:5519576-5519135 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 132

Conread position: 1-443
Cow position: chr2:41656496-41656943 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 17

Conread position: 1-502
Cow position: chr2:1673242-1672762 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-502
Cow position: chr2:15578160-15577661 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 1-502
Cow position: chr2:16288660-16289134 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 1-502
Cow position: chr2:36054223-36053742 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 2-347
Cow position: chr2:202241-201908 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 125

Conread position: 4-387
Cow position: chr2:10843924-10843553 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 4-387
Cow position: chr2:44346130-44346513 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 122

Conread position: 4-396
Cow position: chr2:3837566-3837204 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 4-460
Cow position: chr2:7211119-7211565 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 91

Conread position: 4-502
Cow position: chr2:14821926-14822409 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 14

Conread position: 5-393
Cow position: chr2:422486-422871 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 131

Conread position: 7-267
Cow position: chr2:32458590-32458332 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 12, 126

Conread position: 7-387
Cow position: chr2:32654765-32655134 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 7-391
Cow position: chr2:50402692-50403062 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 10-505
Cow position: chr2:28643698-28643221 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 94

Conread position: 18-381
Cow position: chr2:4404918-4404557 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 18-507
Cow position: chr2:39621723-39622214 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 61

Conread position: 23-380
Cow position: chr2:47810445-47810803 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 110

Conread position: 23-486
Cow position: chr2:7901720-7902172 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 98

Conread position: 23-553
Cow position: chr2:74391682-74391142 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 118

Conread position: 29-413
Cow position: chr2:49604163-49604538 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 31-387
Cow position: chr2:5813959-5813587 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 49

Conread position: 32-393
Cow position: chr2:46946111-46946470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 48-419
Cow position: chr2:50321740-50322113 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 50

Conread position: 83-502
Cow position: chr2:36031241-36030831 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 51

Conread position: 86-431
Cow position: chr2:10612130-10611778 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 91-471
Cow position: chr2:51305232-51304862 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 14

Conread position: 105-474
Cow position: chr2:75676394-75676033 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 56

Conread position: 145-431
Cow position: chr2:54737065-54737354 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 76

Conread position: 150-486
Cow position: chr2:32389345-32389680 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 180

Conread position: 168-414
Cow position: chr2:28616627-28616384 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 172-393
Cow position: chr2:2088591-2088368 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 132

Conread position: 194-414
Cow position: chr2:63977520-63977736 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 54

Conread position: 227-419
Cow position: chr2:85068922-85068733 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 0

Conread position: 228-413
Cow position: chr2:41146884-41147070 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 253-502
Cow position: chr2:41149655-41149906 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 142, 76

Conread position: 267-379
Cow position: chr2:1490299-1490187 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 103
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 274-431
Cow position: chr2:57588381-57588544 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 29

Conread position: 289-425
Cow position: chr2:10733060-10732923 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 52

Conread position: 289-515
Cow position: chr2:73191649-73191872 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 317-502
Cow position: chr2:24393442-24393263 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.